RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	SENP3-EIF4A1	A0A087X0R7	540 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	HSP90AB3P	Q58FF7	597 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	TAOK3	Q9H2K8	898 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	ALDH1B1	P30837	517 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	TCIRG1	Q13488	830 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	NLRP10	Q86W26	655 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	WWC1	Q8IX03	1113 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	C8orf58	Q8NAV2	365 aa		18.95	■□□□□ 0.62
IVD-209	ENST00000497816	SNED1	Q8TER0	1413 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	RNF123	Q5XPI4	1314 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	HOXA10	P31260	410 aa	Predicted RBP	18.94	■□□□□ 0.62
IVD-209	ENST00000497816	NCBP3	Q53F19	620 aa	Known RBP	18.94	■□□□□ 0.62
IVD-209	ENST00000497816	CCDC93	Q567U6	631 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	C3orf67	Q6ZVT6	689 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	PLBD2	Q8NHP8	589 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	UTP14A	Q9BVJ6	771 aa	Known RBP	18.94	■□□□□ 0.62
IVD-209	ENST00000497816	HYPK	Q9NX55	129 aa		18.94	■□□□□ 0.62
IVD-209	ENST00000497816	WDR90	Q96KV7	1748 aa		18.93	■□□□□ 0.62
IVD-209	ENST00000497816	TAF1	P21675	1872 aa		18.93	■□□□□ 0.62
IVD-209	ENST00000497816	ELL2	O00472	640 aa	Predicted RBP	18.93	■□□□□ 0.62
IVD-209	ENST00000497816	SLC10A5	Q5PT55	438 aa		18.93	■□□□□ 0.62
IVD-209	ENST00000497816	OLFM4	Q6UX06	510 aa		18.93	■□□□□ 0.62
IVD-209	ENST00000497816	GLTPD2	A6NH11	291 aa		18.92	■□□□□ 0.62
IVD-209	ENST00000497816	ANKRD13D	Q6ZTN6	518 aa		18.92	■□□□□ 0.62
IVD-209	ENST00000497816	CACNA1F	O60840	1977 aa		18.91	■□□□□ 0.62
IVD-209	ENST00000497816	TOMM70	O94826	608 aa		18.91	■□□□□ 0.62
IVD-209	ENST00000497816	RPGR	Q92834	1020 aa	Known RBP	18.91	■□□□□ 0.62
IVD-209	ENST00000497816	TSR2	Q969E8	191 aa	Known RBP	18.91	■□□□□ 0.62
IVD-209	ENST00000497816	CEP350	Q5VT06	3117 aa		18.91	■□□□□ 0.62
IVD-209	ENST00000497816	TSPYL6	Q8N831	410 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	RRAGC	Q9HB90	399 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	IL16	Q14005	1332 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
IVD-209	ENST00000497816	SYNE4	Q8N205	404 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	NLRP3	Q96P20	1036 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	CRAMP1	Q96RY5	1269 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	ISCA1	Q9BUE6	129 aa		18.9	■□□□□ 0.62
IVD-209	ENST00000497816	RTKN2	Q8IZC4	609 aa		18.89	■□□□□ 0.61
IVD-209	ENST00000497816	RBM17	Q96I25	401 aa	Known RBP	18.89	■□□□□ 0.61
IVD-209	ENST00000497816	PHAX	Q9H814	394 aa	Known RBP	18.89	■□□□□ 0.61
IVD-209	ENST00000497816	TRMT112	Q9UI30	125 aa	Known RBP	18.89	■□□□□ 0.61
IVD-209	ENST00000497816	SH3TC1	Q8TE82	1336 aa		18.87	■□□□□ 0.61
IVD-209	ENST00000497816	HCLS1	P14317	486 aa	Predicted RBP	18.87	■□□□□ 0.61
IVD-209	ENST00000497816	HSPA6	P17066	643 aa		18.87	■□□□□ 0.61
IVD-209	ENST00000497816	CCDC30	Q5VVM6	783 aa		18.87	■□□□□ 0.61
IVD-209	ENST00000497816	RBM46	Q8TBY0	533 aa	Known RBP	18.87	■□□□□ 0.61
IVD-209	ENST00000497816	ATP5J2-PTCD1	G3V325	749 aa		18.86	■□□□□ 0.61
IVD-209	ENST00000497816	CC2D2B	Q6DHV5	1058 aa		18.86	■□□□□ 0.61
IVD-209	ENST00000497816	SLC51A	Q86UW1	340 aa		18.86	■□□□□ 0.61
IVD-209	ENST00000497816	ZNF428	Q96B54	188 aa		18.86	■□□□□ 0.61
IVD-209	ENST00000497816	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.86	■□□□□ 0.61
IVD-209	ENST00000497816	SCN4A	P35499	1836 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	LRRC37A	A6NMS7	1700 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	PPEF1	O14829	653 aa	Predicted RBP	18.85	■□□□□ 0.61
IVD-209	ENST00000497816	GOLGA2	Q08379	1002 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	TRIM28	Q13263	835 aa	Known RBP	18.85	■□□□□ 0.61
IVD-209	ENST00000497816	PSMD1	Q99460	953 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	CHMP4A	Q9BY43	222 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	ABCC4	O15439	1325 aa		18.85	■□□□□ 0.61
IVD-209	ENST00000497816	POTEC	B2RU33	542 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	VEGFA	P15692	232 aa	Predicted RBP	18.84	■□□□□ 0.61
IVD-209	ENST00000497816	DPY19L2	Q6NUT2	758 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	RIC3	Q7Z5B4	369 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.84	■□□□□ 0.61
IVD-209	ENST00000497816	COL4A5	P29400	1685 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	WDR63	Q8IWG1	891 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	FAM9B	Q8IZU0	186 aa		18.84	■□□□□ 0.61
IVD-209	ENST00000497816	SALL2	Q9Y467	1007 aa	Predicted RBP	18.84	■□□□□ 0.61
IVD-209	ENST00000497816	FANCI	Q9NVI1	1328 aa		18.83	■□□□□ 0.61
IVD-209	ENST00000497816	IARS	P41252	1262 aa	Known RBP	18.83	■□□□□ 0.6
IVD-209	ENST00000497816	TWISTNB	Q3B726	338 aa	Predicted RBP	18.83	■□□□□ 0.6
IVD-209	ENST00000497816	GRIPAP1	Q4V328	841 aa		18.83	■□□□□ 0.6
IVD-209	ENST00000497816	FAM89A	Q96GI7	184 aa		18.83	■□□□□ 0.6
IVD-209	ENST00000497816	COL4A1	P02462	1669 aa		18.83	■□□□□ 0.6
IVD-209	ENST00000497816	MYH3	P11055	1940 aa		18.82	■□□□□ 0.6
IVD-209	ENST00000497816	TCERG1	O14776	1098 aa	Known RBP	18.81	■□□□□ 0.6
IVD-209	ENST00000497816	DDN	O94850	711 aa	Predicted RBP	18.81	■□□□□ 0.6
IVD-209	ENST00000497816	ATP6V0A2	Q9Y487	856 aa		18.81	■□□□□ 0.6
IVD-209	ENST00000497816	FSTL1	Q12841	308 aa		18.8	■□□□□ 0.6
IVD-209	ENST00000497816	MYD88	Q99836	296 aa		18.8	■□□□□ 0.6
IVD-209	ENST00000497816	ZNF541	Q9H0D2	1346 aa		18.8	■□□□□ 0.6
IVD-209	ENST00000497816	BBOX1	O75936	387 aa		18.79	■□□□□ 0.6
IVD-209	ENST00000497816	DDX58	O95786	925 aa	Known RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	DDX46	Q7L014	1031 aa	Known RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	METTL22	Q9BUU2	404 aa	Predicted RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	STK31	Q9BXU1	1019 aa		18.79	■□□□□ 0.6
IVD-209	ENST00000497816	FZD9	O00144	591 aa		18.79	■□□□□ 0.6
IVD-209	ENST00000497816	GRAP	Q13588	217 aa		18.79	■□□□□ 0.6
IVD-209	ENST00000497816	SF3B3	Q15393	1217 aa	Known RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	RTL5	Q5HYW3	569 aa	Predicted RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	GRAPL	Q8TC17	118 aa	Predicted RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.79	■□□□□ 0.6
IVD-209	ENST00000497816	DUOX1	Q9NRD9	1551 aa		18.78	■□□□□ 0.6
IVD-209	ENST00000497816	LTBP1	Q14766	1721 aa		18.78	■□□□□ 0.6
IVD-209	ENST00000497816	IRS4	O14654	1257 aa	Predicted RBP	18.78	■□□□□ 0.6
IVD-209	ENST00000497816	KSR2	Q6VAB6	950 aa		18.78	■□□□□ 0.6
IVD-209	ENST00000497816	G2E3	Q7L622	706 aa		18.78	■□□□□ 0.6
IVD-209	ENST00000497816	SP8	Q8IXZ3	490 aa		18.78	■□□□□ 0.6
IVD-209	ENST00000497816	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.78	■□□□□ 0.6
IVD-209	ENST00000497816	CCDC191	Q8NCU4	936 aa		18.78	■□□□□ 0.6

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