RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 NUCB1Q02818 461 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 MTX1Q13505 466 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
COMMD6-212ENST00000497707 CCDC191Q8NCU4 936 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
COMMD6-212ENST00000497707 COL15A1P39059 1388 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 C4BP0C0L5 1744 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 A0A087WZG4 1122 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 PLSCR1O15162 318 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 FOXO4P98177 505 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
COMMD6-212ENST00000497707 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
COMMD6-212ENST00000497707 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
COMMD6-212ENST00000497707 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
COMMD6-212ENST00000497707 ARXQ96QS3 562 aa13.73□□□□□ -0.21
COMMD6-212ENST00000497707 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
COMMD6-212ENST00000497707 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
COMMD6-212ENST00000497707 UBN2Q6ZU65 1347 aa13.72□□□□□ -0.21
COMMD6-212ENST00000497707 GPTP24298 496 aa13.72□□□□□ -0.21
COMMD6-212ENST00000497707 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
COMMD6-212ENST00000497707 SLC27A3Q5K4L6 730 aa13.72□□□□□ -0.21
COMMD6-212ENST00000497707 BCORQ6W2J9 1755 aa13.72□□□□□ -0.21
COMMD6-212ENST00000497707 APBA3O96018 575 aa13.71□□□□□ -0.21
COMMD6-212ENST00000497707 PCCAP05165 728 aaPredicted RBP13.71□□□□□ -0.21
COMMD6-212ENST00000497707 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
COMMD6-212ENST00000497707 ANKRD45Q5TZF3 282 aa13.71□□□□□ -0.21
COMMD6-212ENST00000497707 SUSD4Q5VX71 490 aa13.71□□□□□ -0.21
COMMD6-212ENST00000497707 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
COMMD6-212ENST00000497707 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
COMMD6-212ENST00000497707 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
COMMD6-212ENST00000497707 UBR3Q6ZT12 1888 aa13.71□□□□□ -0.21
COMMD6-212ENST00000497707 GNPATO15228 680 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
COMMD6-212ENST00000497707 HMMRO75330 724 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
COMMD6-212ENST00000497707 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
COMMD6-212ENST00000497707 NARFQ9UHQ1 456 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
COMMD6-212ENST00000497707 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
COMMD6-212ENST00000497707 RGS3P49796 1198 aa13.69□□□□□ -0.22
COMMD6-212ENST00000497707 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
COMMD6-212ENST00000497707 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
COMMD6-212ENST00000497707 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
COMMD6-212ENST00000497707 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
COMMD6-212ENST00000497707 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
COMMD6-212ENST00000497707 RGL2O15211 777 aa13.68□□□□□ -0.22
COMMD6-212ENST00000497707 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
COMMD6-212ENST00000497707 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
COMMD6-212ENST00000497707 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
COMMD6-212ENST00000497707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
COMMD6-212ENST00000497707 C4AP0C0L4 1744 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 SURF6O75683 361 aaKnown RBP13.67□□□□□ -0.22
COMMD6-212ENST00000497707 CSF1RP07333 972 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 TRAPPC3LQ5T215 181 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 TBC1D9BQ66K14 1250 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
COMMD6-212ENST00000497707 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
COMMD6-212ENST00000497707 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
COMMD6-212ENST00000497707 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
COMMD6-212ENST00000497707 ZNF827Q17R98 1081 aa13.66□□□□□ -0.22
COMMD6-212ENST00000497707 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
COMMD6-212ENST00000497707 KLHDC4Q8TBB5 520 aa13.66□□□□□ -0.22
COMMD6-212ENST00000497707 EP400Q96L91 3159 aa13.66□□□□□ -0.22
COMMD6-212ENST00000497707 APBB1O00213 710 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 SASH1O94885 1247 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 NTSR2O95665 410 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 AK7Q96M32 723 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
COMMD6-212ENST00000497707 TRMT112Q9UI30 125 aaKnown RBP13.65□□□□□ -0.22
COMMD6-212ENST00000497707 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
COMMD6-212ENST00000497707 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 RGPD3A6NKT7 1758 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 RGPD4Q7Z3J3 1758 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 PHF14O94880 888 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 TTLL11Q8NHH1 800 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 RHPN1Q8TCX5 695 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 UTP14AQ9BVJ6 771 aaKnown RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
COMMD6-212ENST00000497707 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
COMMD6-212ENST00000497707 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
COMMD6-212ENST00000497707 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-212ENST00000497707 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-212ENST00000497707 ZPR1O75312 459 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms