RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 KCNA3P22001 575 aa20.68■□□□□ 0.9
FAM3A-220ENST00000497506 BRPF1P55201 1214 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-220ENST00000497506 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
FAM3A-220ENST00000497506 BRCA1P38398 1863 aaKnown RBP20.68■□□□□ 0.9
FAM3A-220ENST00000497506 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
FAM3A-220ENST00000497506 F6X3S4 739 aa20.67■□□□□ 0.9
FAM3A-220ENST00000497506 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
FAM3A-220ENST00000497506 CHRNA5P30532 468 aa20.67■□□□□ 0.9
FAM3A-220ENST00000497506 CCDC191Q8NCU4 936 aa20.67■□□□□ 0.9
FAM3A-220ENST00000497506 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
FAM3A-220ENST00000497506 TNRC6CQ9HCJ0 1690 aaKnown RBP20.67■□□□□ 0.9
FAM3A-220ENST00000497506 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
FAM3A-220ENST00000497506 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
FAM3A-220ENST00000497506 PDE6BP35913 854 aa20.66■□□□□ 0.9
FAM3A-220ENST00000497506 NEXNQ0ZGT2 675 aa20.66■□□□□ 0.9
FAM3A-220ENST00000497506 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
FAM3A-220ENST00000497506 TRMT112Q9UI30 125 aaKnown RBP20.66■□□□□ 0.9
FAM3A-220ENST00000497506 PTPRCP08575 1304 aa20.66■□□□□ 0.9
FAM3A-220ENST00000497506 RIC1Q4ADV7 1423 aa20.66■□□□□ 0.9
FAM3A-220ENST00000497506 KLRG2A4D1S0 409 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-220ENST00000497506 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
FAM3A-220ENST00000497506 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
FAM3A-220ENST00000497506 SH3TC1Q8TE82 1336 aa20.64■□□□□ 0.89
FAM3A-220ENST00000497506 NEURL1BA8MQ27 555 aa20.64■□□□□ 0.89
FAM3A-220ENST00000497506 CWF19L2Q2TBE0 894 aaKnown RBP20.64■□□□□ 0.89
FAM3A-220ENST00000497506 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
FAM3A-220ENST00000497506 CWC25Q9NXE8 425 aaPredicted RBP20.64■□□□□ 0.89
FAM3A-220ENST00000497506 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.89
FAM3A-220ENST00000497506 H0YIN7 160 aa20.63■□□□□ 0.89
FAM3A-220ENST00000497506 BCAR3O75815 825 aa20.63■□□□□ 0.89
FAM3A-220ENST00000497506 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
FAM3A-220ENST00000497506 FAM89AQ96GI7 184 aa20.63■□□□□ 0.89
FAM3A-220ENST00000497506 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
FAM3A-220ENST00000497506 DDX60Q8IY21 1712 aaKnown RBP20.63■□□□□ 0.89
FAM3A-220ENST00000497506 LAMB2P55268 1798 aa20.62■□□□□ 0.89
FAM3A-220ENST00000497506 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
FAM3A-220ENST00000497506 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-220ENST00000497506 SRGNP10124 158 aa20.61■□□□□ 0.89
FAM3A-220ENST00000497506 HCLS1P14317 486 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-220ENST00000497506 C3orf67Q6ZVT6 689 aa20.61■□□□□ 0.89
FAM3A-220ENST00000497506 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
FAM3A-220ENST00000497506 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
FAM3A-220ENST00000497506 YBX3P16989 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
FAM3A-220ENST00000497506 GCKRQ14397 625 aa20.6■□□□□ 0.89
FAM3A-220ENST00000497506 CRY2Q49AN0 593 aa20.6■□□□□ 0.89
FAM3A-220ENST00000497506 RTL5Q5HYW3 569 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-220ENST00000497506 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
FAM3A-220ENST00000497506 KIF16BQ96L93 1317 aa20.59■□□□□ 0.89
FAM3A-220ENST00000497506 JARID2Q92833 1246 aaPredicted RBP20.59■□□□□ 0.89
FAM3A-220ENST00000497506 H7C1W4 665 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 IRS4O14654 1257 aaPredicted RBP20.58■□□□□ 0.89
FAM3A-220ENST00000497506 NPR1P16066 1061 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 GPR162Q16538 588 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 STYK1Q6J9G0 422 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 PELP1Q8IZL8 1130 aaKnown RBP20.58■□□□□ 0.89
FAM3A-220ENST00000497506 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 MASTLQ96GX5 879 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
FAM3A-220ENST00000497506 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
FAM3A-220ENST00000497506 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
FAM3A-220ENST00000497506 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
FAM3A-220ENST00000497506 API5Q9BZZ5 524 aaKnown RBP20.57■□□□□ 0.88
FAM3A-220ENST00000497506 SRCIN1Q9C0H9 1055 aa20.57■□□□□ 0.88
FAM3A-220ENST00000497506 CDHR2Q9BYE9 1310 aa20.56■□□□□ 0.88
FAM3A-220ENST00000497506 CACNA1SQ13698 1873 aa20.56■□□□□ 0.88
FAM3A-220ENST00000497506 DALRD3Q5D0E6 543 aaKnown RBP20.56■□□□□ 0.88
FAM3A-220ENST00000497506 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
FAM3A-220ENST00000497506 BCS1LQ9Y276 419 aa20.56■□□□□ 0.88
FAM3A-220ENST00000497506 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
FAM3A-220ENST00000497506 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
FAM3A-220ENST00000497506 CASP7P55210 303 aa20.55■□□□□ 0.88
FAM3A-220ENST00000497506 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
FAM3A-220ENST00000497506 IPO8O15397 1037 aaKnown RBP20.54■□□□□ 0.88
FAM3A-220ENST00000497506 UBE3BQ7Z3V4 1068 aa20.54■□□□□ 0.88
FAM3A-220ENST00000497506 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
FAM3A-220ENST00000497506 CNKSR1Q969H4 720 aa20.54■□□□□ 0.88
FAM3A-220ENST00000497506 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
FAM3A-220ENST00000497506 ATF7IPQ6VMQ6 1270 aa20.53■□□□□ 0.88
FAM3A-220ENST00000497506 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
FAM3A-220ENST00000497506 TNNQ9UQP3 1299 aa20.53■□□□□ 0.88
FAM3A-220ENST00000497506 MYH3P11055 1940 aa20.53■□□□□ 0.88
FAM3A-220ENST00000497506 GOLGB1Q14789 3259 aaKnown RBP20.52■□□□□ 0.88
FAM3A-220ENST00000497506 GRM8O00222 908 aa20.52■□□□□ 0.88
FAM3A-220ENST00000497506 PDE8AO60658 829 aa20.52■□□□□ 0.88
FAM3A-220ENST00000497506 TRIM27P14373 513 aa20.52■□□□□ 0.88
FAM3A-220ENST00000497506 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
FAM3A-220ENST00000497506 CRAMP1Q96RY5 1269 aa20.52■□□□□ 0.88
FAM3A-220ENST00000497506 RCAN3Q9UKA8 241 aa20.52■□□□□ 0.88
FAM3A-220ENST00000497506 TAF1P21675 1872 aa20.52■□□□□ 0.87
FAM3A-220ENST00000497506 ABCC4O15439 1325 aa20.52■□□□□ 0.87
FAM3A-220ENST00000497506 GRIN3BO60391 1043 aa20.51■□□□□ 0.87
FAM3A-220ENST00000497506 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
FAM3A-220ENST00000497506 ZKSCAN2Q63HK3 967 aa20.51■□□□□ 0.87
FAM3A-220ENST00000497506 PRPF40BQ6NWY9 871 aaKnown RBP20.51■□□□□ 0.87
FAM3A-220ENST00000497506 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
FAM3A-220ENST00000497506 UTYO14607 1347 aa20.51■□□□□ 0.87
FAM3A-220ENST00000497506 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
FAM3A-220ENST00000497506 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
FAM3A-220ENST00000497506 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
FAM3A-220ENST00000497506 C9orf78Q9NZ63 289 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms