RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
GTF2E1-205ENST00000497393 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
GTF2E1-205ENST00000497393 F11P03951 625 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 USP5P45974 858 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 ORC1Q13415 861 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 RNF19AQ9NV58 838 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 ANKIB1Q9P2G1 1089 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 GJA3Q9Y6H8 435 aa6.86□□□□□ -1.31
GTF2E1-205ENST00000497393 PTSQ03393 145 aa6.85□□□□□ -1.31
GTF2E1-205ENST00000497393 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
GTF2E1-205ENST00000497393 PIK3R5Q8WYR1 880 aa6.85□□□□□ -1.31
GTF2E1-205ENST00000497393 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
GTF2E1-205ENST00000497393 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
GTF2E1-205ENST00000497393 PNMA6FA0A0J9YX94 578 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 LDHBP07195 334 aaKnown RBP6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 PCSK2P16519 638 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 PLCB3Q01970 1234 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 LAPTM4AQ15012 233 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 ZNF326Q5BKZ1 582 aaKnown RBP6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 RIPOR1Q6ZS17 1223 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 PGBD3Q8N328 593 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 CUEDC1Q9NWM3 386 aaPredicted RBP6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
GTF2E1-205ENST00000497393 DCDC2BA2VCK2 349 aa6.83□□□□□ -1.32
GTF2E1-205ENST00000497393 FAM161BQ96MY7 647 aa6.83□□□□□ -1.32
GTF2E1-205ENST00000497393 ZCCHC2Q9C0B9 1178 aaKnown RBP6.83□□□□□ -1.32
GTF2E1-205ENST00000497393 BRD7Q9NPI1 651 aa6.83□□□□□ -1.32
GTF2E1-205ENST00000497393 SLC35F4A4IF30 521 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 UBAP2LQ14157 1087 aaKnown RBP6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 ENOX2Q16206 610 aaKnown RBP6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 SAMD5Q5TGI4 173 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 NLRP8Q86W28 1048 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 DUSP9Q99956 384 aaKnown RBP6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 CFHR5Q9BXR6 569 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 IRX2Q9BZI1 471 aaPredicted RBP6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 HCN2Q9UL51 889 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 CCDC180Q9P1Z9 1646 aa6.82□□□□□ -1.32
GTF2E1-205ENST00000497393 EIF1AYO14602 144 aaKnown RBP6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 PRPF40AO75400 957 aaKnown RBP6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 GRIN2CQ14957 1233 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 CCDC155Q8N6L0 562 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 TTC16Q8NEE8 873 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 TRIM47Q96LD4 638 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 CSRNP1Q96S65 589 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 TMEM63CQ9P1W3 806 aa6.81□□□□□ -1.32
GTF2E1-205ENST00000497393 LCE2BO14633 110 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 XYLBO75191 536 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 TNFRSF21O75509 655 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 RECKO95980 971 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 EPB42P16452 691 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 SFSWAPQ12872 951 aaKnown RBP6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 DBN1Q16643 649 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 PARP2Q9UGN5 583 aa6.8□□□□□ -1.32
GTF2E1-205ENST00000497393 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 EFSO43281 561 aa6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 SNX29Q8TEQ0 813 aa6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 ZNF837Q96EG3 531 aaPredicted RBP6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 ELP3Q9H9T3 547 aa6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 FNDC3AQ9Y2H6 1198 aaKnown RBP6.79□□□□□ -1.32
GTF2E1-205ENST00000497393 MRPL58Q14197 206 aaKnown RBP6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 LBRQ14739 615 aaKnown RBP6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 PDE12Q6L8Q7 609 aaKnown RBP6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 FIGNL1Q6PIW4 674 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 KRT25Q7Z3Z0 450 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 KIFC2Q96AC6 838 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 CHRDQ9H2X0 955 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 KCNH4Q9UQ05 1017 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 PCDHGC4Q9Y5F7 938 aa6.78□□□□□ -1.32
GTF2E1-205ENST00000497393 BNIP3LO60238 219 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 PHACTR2O75167 634 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 MAPTP10636 758 aaKnown RBP6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 ITGA6P23229 1130 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 IRS1P35568 1242 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 TNP2Q05952 138 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 TSNAXIP1Q2TAA8 658 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
GTF2E1-205ENST00000497393 TRIM22Q8IYM9 498 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms