RNA–Protein interactions for RNA: ENST00000497315.5

PSMD6-211, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-211ENST00000497315 ECM1Q16610 540 aa8.79□□□□□ -1
PSMD6-211ENST00000497315 ALKBH2Q6NS38 261 aa8.79□□□□□ -1
PSMD6-211ENST00000497315 STRN4Q9NRL3 753 aa8.79□□□□□ -1
PSMD6-211ENST00000497315 VSIG8P0DPA2 414 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 EPB42P16452 691 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 FGFR3P22607 806 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 ARHGAP4P98171 946 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 DNM1Q05193 864 aaKnown RBP8.78□□□□□ -1
PSMD6-211ENST00000497315 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
PSMD6-211ENST00000497315 SND1Q7KZF4 910 aaKnown RBP eCLIP8.78□□□□□ -1
PSMD6-211ENST00000497315 IRF7Q92985 503 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
PSMD6-211ENST00000497315 CFHR5Q9BXR6 569 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 HCN2Q9UL51 889 aa8.78□□□□□ -1
PSMD6-211ENST00000497315 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
PSMD6-211ENST00000497315 GRNP28799 593 aaKnown RBP8.77□□□□□ -1.01
PSMD6-211ENST00000497315 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
PSMD6-211ENST00000497315 EDEM1Q92611 657 aa8.77□□□□□ -1.01
PSMD6-211ENST00000497315 CCDC87Q9NVE4 849 aa8.77□□□□□ -1.01
PSMD6-211ENST00000497315 FAM13BQ9NYF5 915 aa8.77□□□□□ -1.01
PSMD6-211ENST00000497315 MARK1Q9P0L2 795 aa8.77□□□□□ -1.01
PSMD6-211ENST00000497315 KCNH4Q9UQ05 1017 aa8.77□□□□□ -1.01
PSMD6-211ENST00000497315 FZD6O60353 706 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 CTBSQ01459 385 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 LAMC2Q13753 1193 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 GAS6Q14393 721 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 PIK3R5Q8WYR1 880 aa8.76□□□□□ -1.01
PSMD6-211ENST00000497315 WFS1O76024 890 aa8.75□□□□□ -1.01
PSMD6-211ENST00000497315 MX2P20592 715 aa8.75□□□□□ -1.01
PSMD6-211ENST00000497315 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
PSMD6-211ENST00000497315 COL25A1Q9BXS0 654 aaPredicted RBP8.75□□□□□ -1.01
PSMD6-211ENST00000497315 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
PSMD6-211ENST00000497315 POLIQ9UNA4 740 aa8.75□□□□□ -1.01
PSMD6-211ENST00000497315 PDGFAP04085 211 aa8.74□□□□□ -1.01
PSMD6-211ENST00000497315 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
PSMD6-211ENST00000497315 KCNQ4P56696 695 aa8.74□□□□□ -1.01
PSMD6-211ENST00000497315 NDUFB5O43674 189 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 BMP4P12644 408 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 PCSK2P16519 638 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 RNFT1Q5M7Z0 435 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 RAB44Q7Z6P3 723 aaPredicted RBP8.73□□□□□ -1.01
PSMD6-211ENST00000497315 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
PSMD6-211ENST00000497315 XYLBO75191 536 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 MAPK1P28482 360 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
PSMD6-211ENST00000497315 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 MBIPQ9NS73 344 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
PSMD6-211ENST00000497315 A6NHS1 94 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 UBAP1LF5GYI3 381 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 C2CD2LO14523 706 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 KRT76Q01546 638 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 FAM182BQ5T319 152 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 TTC16Q8NEE8 873 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 CNTNAP3Q9BZ76 1288 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
PSMD6-211ENST00000497315 GMPRP36959 345 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
PSMD6-211ENST00000497315 CCINQ13939 588 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 TMCO4Q5TGY1 634 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 TMC1Q8TDI8 760 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 PNMA5Q96PV4 448 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
PSMD6-211ENST00000497315 FNDC3AQ9Y2H6 1198 aaKnown RBP8.7□□□□□ -1.02
PSMD6-211ENST00000497315 SASH3O75995 380 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 USP5P45974 858 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 BHMTQ93088 406 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 NSFL1CQ9UNZ2 370 aaKnown RBP8.69□□□□□ -1.02
PSMD6-211ENST00000497315 IGF1RP08069 1367 aa8.69□□□□□ -1.02
PSMD6-211ENST00000497315 RPLP1P05386 114 aaKnown RBP8.68□□□□□ -1.02
PSMD6-211ENST00000497315 NFKB1P19838 968 aa8.68□□□□□ -1.02
PSMD6-211ENST00000497315 TARSP26639 723 aaKnown RBP8.68□□□□□ -1.02
PSMD6-211ENST00000497315 GJD3Q8N144 294 aa8.68□□□□□ -1.02
PSMD6-211ENST00000497315 EGFRP00533 1210 aa8.67□□□□□ -1.02
PSMD6-211ENST00000497315 PCBP4P57723 403 aaKnown RBP8.67□□□□□ -1.02
PSMD6-211ENST00000497315 NEUROD1Q13562 356 aa8.67□□□□□ -1.02
PSMD6-211ENST00000497315 ZNF438Q7Z4V0 828 aa8.67□□□□□ -1.02
PSMD6-211ENST00000497315 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
PSMD6-211ENST00000497315 RARAP10276 462 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 MAP2K3P46734 347 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
PSMD6-211ENST00000497315 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
PSMD6-211ENST00000497315 SYT9Q86SS6 491 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 C11orf16Q9NQ32 467 aa8.66□□□□□ -1.02
PSMD6-211ENST00000497315 ADAMTS2O95450 1211 aa8.65□□□□□ -1.02
PSMD6-211ENST00000497315 EHHADHQ08426 723 aa8.65□□□□□ -1.02
PSMD6-211ENST00000497315 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
PSMD6-211ENST00000497315 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
PSMD6-211ENST00000497315 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms