RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ADAMTS8Q9UP79 889 aa22.42■■□□□ 1.18
SMC4-226ENST00000497311 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
SMC4-226ENST00000497311 LAS1LQ9Y4W2 734 aaKnown RBP22.42■■□□□ 1.18
SMC4-226ENST00000497311 IARSP41252 1262 aaKnown RBP22.41■■□□□ 1.18
SMC4-226ENST00000497311 RBM17Q96I25 401 aaKnown RBP22.41■■□□□ 1.18
SMC4-226ENST00000497311 IQCA1LA6NCM1 817 aa22.4■■□□□ 1.18
SMC4-226ENST00000497311 IFFO2Q5TF58 517 aa22.4■■□□□ 1.18
SMC4-226ENST00000497311 COPS6Q7L5N1 327 aa22.4■■□□□ 1.18
SMC4-226ENST00000497311 L3MBTL3Q96JM7 780 aaPredicted RBP22.4■■□□□ 1.18
SMC4-226ENST00000497311 PSMD1Q99460 953 aa22.4■■□□□ 1.18
SMC4-226ENST00000497311 UTP14AQ9BVJ6 771 aaKnown RBP22.4■■□□□ 1.18
SMC4-226ENST00000497311 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
SMC4-226ENST00000497311 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
SMC4-226ENST00000497311 HSP90AB3PQ58FF7 597 aa22.39■■□□□ 1.17
SMC4-226ENST00000497311 CHADLQ6NUI6 762 aa22.39■■□□□ 1.17
SMC4-226ENST00000497311 JMYQ8N9B5 988 aa22.39■■□□□ 1.17
SMC4-226ENST00000497311 NLRP3Q96P20 1036 aa22.39■■□□□ 1.17
SMC4-226ENST00000497311 CRAMP1Q96RY5 1269 aa22.39■■□□□ 1.17
SMC4-226ENST00000497311 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
SMC4-226ENST00000497311 GRIPAP1Q4V328 841 aa22.38■■□□□ 1.17
SMC4-226ENST00000497311 XAGE3Q8WTP9 111 aa22.38■■□□□ 1.17
SMC4-226ENST00000497311 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
SMC4-226ENST00000497311 ZNF541Q9H0D2 1346 aa22.37■■□□□ 1.17
SMC4-226ENST00000497311 JDP2Q8WYK2 163 aa22.37■■□□□ 1.17
SMC4-226ENST00000497311 SNED1Q8TER0 1413 aa22.37■■□□□ 1.17
SMC4-226ENST00000497311 SCN4AP35499 1836 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 FZD9O00144 591 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 PPEF1O14829 653 aaPredicted RBP22.36■■□□□ 1.17
SMC4-226ENST00000497311 POTEIP0CG38 1075 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 POTEJP0CG39 1038 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 C3orf67Q6ZVT6 689 aa22.36■■□□□ 1.17
SMC4-226ENST00000497311 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
SMC4-226ENST00000497311 TCERG1O14776 1098 aaKnown RBP22.35■■□□□ 1.17
SMC4-226ENST00000497311 TAF1DQ9H5J8 278 aaPredicted RBP22.35■■□□□ 1.17
SMC4-226ENST00000497311 HOXB7P09629 217 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 TCIRG1Q13488 830 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 HDGFL1Q5TGJ6 251 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 NLRP10Q86W26 655 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
SMC4-226ENST00000497311 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 HACL1Q9UJ83 578 aa22.34■■□□□ 1.17
SMC4-226ENST00000497311 LDHDQ86WU2 507 aa22.33■■□□□ 1.17
SMC4-226ENST00000497311 GPC2Q8N158 579 aa22.32■■□□□ 1.16
SMC4-226ENST00000497311 TRMT112Q9UI30 125 aaKnown RBP22.32■■□□□ 1.16
SMC4-226ENST00000497311 ANKRD36CQ5JPF3 1778 aa22.32■■□□□ 1.16
SMC4-226ENST00000497311 EIF6P56537 245 aaKnown RBP22.31■■□□□ 1.16
SMC4-226ENST00000497311 EAPPQ56P03 285 aaPredicted RBP22.31■■□□□ 1.16
SMC4-226ENST00000497311 LARGE2Q8N3Y3 721 aa22.31■■□□□ 1.16
SMC4-226ENST00000497311 DBF4Q9UBU7 674 aaPredicted RBP22.31■■□□□ 1.16
SMC4-226ENST00000497311 HCLS1P14317 486 aaPredicted RBP22.3■■□□□ 1.16
SMC4-226ENST00000497311 EPHX2P34913 555 aa22.3■■□□□ 1.16
SMC4-226ENST00000497311 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
SMC4-226ENST00000497311 ABCC4O15439 1325 aa22.3■■□□□ 1.16
SMC4-226ENST00000497311 SH3TC1Q8TE82 1336 aa22.3■■□□□ 1.16
SMC4-226ENST00000497311 APAF1O14727 1248 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 DUSP27Q5VZP5 1158 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 ANKRD13DQ6ZTN6 518 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 SLC51AQ86UW1 340 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 PNMA8AQ86V59 439 aaPredicted RBP22.29■■□□□ 1.16
SMC4-226ENST00000497311 PLBD2Q8NHP8 589 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
SMC4-226ENST00000497311 BBOX1O75936 387 aa22.28■■□□□ 1.16
SMC4-226ENST00000497311 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
SMC4-226ENST00000497311 GJA3Q9Y6H8 435 aa22.28■■□□□ 1.16
SMC4-226ENST00000497311 PCNTO95613 3336 aa22.27■■□□□ 1.16
SMC4-226ENST00000497311 CALD1Q05682 793 aaKnown RBP22.27■■□□□ 1.16
SMC4-226ENST00000497311 DDX46Q7L014 1031 aaKnown RBP22.27■■□□□ 1.16
SMC4-226ENST00000497311 COL4A5P29400 1685 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 NIM1KQ8IY84 436 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 VPS33BQ9H267 617 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 IFT57Q9NWB7 429 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
SMC4-226ENST00000497311 GNAI1P63096 354 aa22.25■■□□□ 1.15
SMC4-226ENST00000497311 SP8Q8IXZ3 490 aa22.25■■□□□ 1.15
SMC4-226ENST00000497311 SUPT20HQ8NEM7 779 aa22.25■■□□□ 1.15
SMC4-226ENST00000497311 LAMB2P55268 1798 aa22.25■■□□□ 1.15
SMC4-226ENST00000497311 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
SMC4-226ENST00000497311 LMOD1P29536 600 aaPredicted RBP22.24■■□□□ 1.15
SMC4-226ENST00000497311 AOC3Q16853 763 aa22.24■■□□□ 1.15
SMC4-226ENST00000497311 ZNF428Q96B54 188 aa22.24■■□□□ 1.15
SMC4-226ENST00000497311 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
SMC4-226ENST00000497311 ATP5J2-PTCD1G3V325 749 aa22.23■■□□□ 1.15
SMC4-226ENST00000497311 GRAPQ13588 217 aa22.23■■□□□ 1.15
SMC4-226ENST00000497311 DPP8Q6V1X1 898 aaPredicted RBP22.23■■□□□ 1.15
SMC4-226ENST00000497311 MPNDQ8N594 471 aa22.23■■□□□ 1.15
SMC4-226ENST00000497311 GRAPLQ8TC17 118 aaPredicted RBP22.23■■□□□ 1.15
SMC4-226ENST00000497311 RTFDC1Q9BY42 306 aaPredicted RBP22.23■■□□□ 1.15
SMC4-226ENST00000497311 MKRN1Q9UHC7 482 aaKnown RBP22.23■■□□□ 1.15
SMC4-226ENST00000497311 FAM89AQ96GI7 184 aa22.22■■□□□ 1.15
SMC4-226ENST00000497311 ADAMTSL1Q8N6G6 1762 aa22.22■■□□□ 1.15
SMC4-226ENST00000497311 TMEM88BA6NKF7 163 aa22.21■■□□□ 1.15
SMC4-226ENST00000497311 ELL2O00472 640 aaPredicted RBP22.21■■□□□ 1.15
SMC4-226ENST00000497311 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
SMC4-226ENST00000497311 MAP1SQ66K74 1059 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms