RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 GZF1Q9H116 711 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 ANO2Q9NQ90 1003 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 ZNF608Q9ULD9 1512 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 H3BM21 787 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 TGFBR3LH3BV60 316 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 EFSO43281 561 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 MPSTP25325 297 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 LBRQ14739 615 aaKnown RBP5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 C11orf91Q3C1V1 193 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 NLRP8Q86W28 1048 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 VTI1AQ96AJ9 217 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 GAS2L1Q99501 681 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 STIM2Q9P246 746 aa5.78□□□□□ -1.48
EXOSC3-208ENST00000496910 PATL2C9JE40 543 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 H3BRB1 525 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 OPLAHO14841 1288 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 VSIG8P0DPA2 414 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 FKBP4Q02790 459 aaKnown RBP eCLIP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 TYRO3Q06418 890 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 SF3B2Q13435 895 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 LRRC69Q6ZNQ3 347 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 IFT43Q96FT9 208 aa5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 TUT1Q9H6E5 874 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 NXF1Q9UBU9 619 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-208ENST00000496910 FZD6O60353 706 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 ABL1P00519 1130 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 IGHA2P01877 340 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 FAM157BP0CG42 384 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 INPP5BP32019 993 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 VEGFBP49765 207 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 NOM1Q5C9Z4 860 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 SND1Q7KZF4 910 aaKnown RBP eCLIP5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 BTLAQ7Z6A9 289 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 NPAS3Q8IXF0 933 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 GPR161Q8N6U8 529 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 GMCL1Q96IK5 515 aa5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 ZCCHC2Q9C0B9 1178 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 NUCKS1Q9H1E3 243 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-208ENST00000496910 ERBB4Q15303 1308 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 BNIP3LO60238 219 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 EIF5BO60841 1220 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 MICAL2O94851 1124 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 EIF1AXP47813 144 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 KCNQ4P56696 695 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 NFX1Q12986 1120 aaKnown RBP5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 GAS6Q14393 721 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 ARSJQ5FYB0 599 aaPredicted RBP5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 BICDL1Q6ZP65 573 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 RIPOR1Q6ZS17 1223 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 ATCAYQ86WG3 371 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 TREML1Q86YW5 311 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 STRN4Q9NRL3 753 aa5.75□□□□□ -1.49
EXOSC3-208ENST00000496910 BRD2P25440 801 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-208ENST00000496910 TNP2Q05952 138 aa5.74□□□□□ -1.49
EXOSC3-208ENST00000496910 GRIN2CQ14957 1233 aa5.74□□□□□ -1.49
EXOSC3-208ENST00000496910 GTPBP3Q969Y2 492 aaKnown RBP5.74□□□□□ -1.49
EXOSC3-208ENST00000496910 COL17A1Q9UMD9 1497 aaPredicted RBP5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 H7C1W4 665 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 TERTO14746 1132 aaKnown RBP5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 ZAP70P43403 619 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 IDH3AP50213 366 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 TRIP4Q15650 581 aaPredicted RBP5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 HIF1AQ16665 826 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 PGBD3Q8N328 593 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 VWA5B2Q8N398 1253 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 ABTB2Q8N961 1025 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 ANKIB1Q9P2G1 1089 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 PCDHGC4Q9Y5F7 938 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 KCNMB2Q9Y691 235 aa5.73□□□□□ -1.49
EXOSC3-208ENST00000496910 STRCQ7RTU9 1775 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 GPR25O00155 361 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 ATXN7O15265 892 aaPredicted RBP5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 FAM13AO94988 1023 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 MAPTP10636 758 aaKnown RBP5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 HSP90B1P14625 803 aaKnown RBP5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 CDK11BP21127 795 aaKnown RBP5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 KRT76Q01546 638 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 EFHC2Q5JST6 749 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 ABHD17AQ96GS6 310 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 CCDC87Q9NVE4 849 aa5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 CDK11AQ9UQ88 783 aaPredicted RBP5.72□□□□□ -1.49
EXOSC3-208ENST00000496910 DCDC2BA2VCK2 349 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 PDGFAP04085 211 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 SFSWAPQ12872 951 aaKnown RBP5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 RNFT1Q5M7Z0 435 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 FIGNL1Q6PIW4 674 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 DNAJC14Q6Y2X3 702 aaPredicted RBP5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 GJD3Q8N144 294 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 PUS7Q96PZ0 661 aaKnown RBP5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 CFHR5Q9BXR6 569 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 BRD7Q9NPI1 651 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 ATXN7L1Q9ULK2 861 aaPredicted RBP5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 USP20Q9Y2K6 914 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 ADAMTSL3P82987 1691 aa5.71□□□□□ -1.5
EXOSC3-208ENST00000496910 E9PSI1 815 aa5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 C2CD2LO14523 706 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms