RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 PLCG2P16885 1265 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 VEGFBP49765 207 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 SOX10P56693 466 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 SLC39A6Q13433 755 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 WBP1LQ9NX94 342 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 RNF181Q9P0P0 153 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 ARFGEF1Q9Y6D6 1849 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 C10orf71Q711Q0 1435 aa7.84□□□□□ -1.15
HMGCL-206ENST00000496907 CNTNAP4Q9C0A0 1308 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 IL6STP40189 918 aaPredicted RBP7.83□□□□□ -1.16
HMGCL-206ENST00000496907 NUBP1P53384 320 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 HNRNPUQ00839 825 aaKnown RBP eCLIP7.83□□□□□ -1.16
HMGCL-206ENST00000496907 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 CCDC30Q5VVM6 783 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 LINC00116Q8NCU8 138 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 MBIPQ9NS73 344 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 CCDC87Q9NVE4 849 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.83□□□□□ -1.16
HMGCL-206ENST00000496907 SALL2Q9Y467 1007 aaPredicted RBP7.83□□□□□ -1.16
HMGCL-206ENST00000496907 C4AP0C0L4 1744 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 CNTNAP1P78357 1384 aa7.83□□□□□ -1.16
HMGCL-206ENST00000496907 ZNF521Q96K83 1311 aa7.82□□□□□ -1.16
HMGCL-206ENST00000496907 CYP19A1P11511 503 aaPredicted RBP7.82□□□□□ -1.16
HMGCL-206ENST00000496907 THUMPD2Q9BTF0 503 aaKnown RBP7.82□□□□□ -1.16
HMGCL-206ENST00000496907 MCOLN1Q9GZU1 580 aa7.82□□□□□ -1.16
HMGCL-206ENST00000496907 MIS18AQ9NYP9 233 aa7.82□□□□□ -1.16
HMGCL-206ENST00000496907 DBF4Q9UBU7 674 aaPredicted RBP7.82□□□□□ -1.16
HMGCL-206ENST00000496907 TSKSQ9UJT2 592 aa7.82□□□□□ -1.16
HMGCL-206ENST00000496907 ADAMTS7Q9UKP4 1686 aa7.82□□□□□ -1.16
HMGCL-206ENST00000496907 ZBED9Q6R2W3 1325 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 RFC4P35249 363 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 CRKLP46109 303 aaKnown RBP7.81□□□□□ -1.16
HMGCL-206ENST00000496907 SLFN5Q08AF3 891 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 ITPK1Q13572 414 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 DNAJC10Q8IXB1 793 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 RASEFQ8IZ41 740 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 STK31Q9BXU1 1019 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 HYPKQ9NX55 129 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 PIM2Q9P1W9 311 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
HMGCL-206ENST00000496907 KCNQ3O43525 872 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 ZPR1O75312 459 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 IRX5P78411 483 aaPredicted RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 TWISTNBQ3B726 338 aaPredicted RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 DALRD3Q5D0E6 543 aaKnown RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 HABP4Q5JVS0 413 aaKnown RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 CLEC4GQ6UXB4 293 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 TRMT2AQ8IZ69 625 aaKnown RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 SPOCK2Q92563 424 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 SLC4A9Q96Q91 983 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGCL-206ENST00000496907 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 SBF1O95248 1867 aa7.8□□□□□ -1.16
HMGCL-206ENST00000496907 SCN11AQ9UI33 1791 aa7.79□□□□□ -1.16
HMGCL-206ENST00000496907 TIAM2Q8IVF5 1701 aa7.79□□□□□ -1.16
HMGCL-206ENST00000496907 ERVV-1B6SEH8 477 aa7.79□□□□□ -1.16
HMGCL-206ENST00000496907 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
HMGCL-206ENST00000496907 EIF2S2P20042 333 aaKnown RBP7.79□□□□□ -1.16
HMGCL-206ENST00000496907 EIF5P55010 431 aaKnown RBP7.79□□□□□ -1.16
HMGCL-206ENST00000496907 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
HMGCL-206ENST00000496907 INTS5Q6P9B9 1019 aaKnown RBP7.79□□□□□ -1.16
HMGCL-206ENST00000496907 VAMP4O75379 141 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
HMGCL-206ENST00000496907 CANXP27824 592 aaKnown RBP7.78□□□□□ -1.16
HMGCL-206ENST00000496907 ALDH1L2Q3SY69 923 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 HSP90AB3PQ58FF7 597 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 KIF6Q6ZMV9 814 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 NARFQ9UHQ1 456 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
HMGCL-206ENST00000496907 A1BGP04217 495 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 GYS1P13807 737 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
HMGCL-206ENST00000496907 KCNA3P22001 575 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 CHRNA5P30532 468 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 RASSF7Q02833 373 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
HMGCL-206ENST00000496907 MPNDQ8N594 471 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 C8orf58Q8NAV2 365 aa7.77□□□□□ -1.17
HMGCL-206ENST00000496907 ARHGEF1Q92888 912 aaKnown RBP7.77□□□□□ -1.17
HMGCL-206ENST00000496907 COL5A3P25940 1745 aaPredicted RBP7.77□□□□□ -1.17
HMGCL-206ENST00000496907 ELL2O00472 640 aaPredicted RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 IPO8O15397 1037 aaKnown RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 BRPF1P55201 1214 aaPredicted RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 DGKZQ13574 1117 aa7.76□□□□□ -1.17
HMGCL-206ENST00000496907 ANKRD13DQ6ZTN6 518 aa7.76□□□□□ -1.17
HMGCL-206ENST00000496907 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 TSR2Q969E8 191 aaKnown RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 ZBTB47Q9UFB7 747 aaPredicted RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 ZBTB1Q9Y2K1 713 aa7.76□□□□□ -1.17
HMGCL-206ENST00000496907 ZC3H4Q9UPT8 1303 aaKnown RBP7.76□□□□□ -1.17
HMGCL-206ENST00000496907 VIRMAQ69YN4 1812 aaKnown RBP7.75□□□□□ -1.17
HMGCL-206ENST00000496907 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 GLTPD2A6NH11 291 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 MS4A1P11836 297 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms