RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CTBSQ01459 385 aa8.66□□□□□ -1.02
TRIM4-205ENST00000496896 RTN1Q16799 776 aa8.66□□□□□ -1.02
TRIM4-205ENST00000496896 LRRC69Q6ZNQ3 347 aa8.66□□□□□ -1.02
TRIM4-205ENST00000496896 SLCO4C1Q6ZQN7 724 aa8.66□□□□□ -1.02
TRIM4-205ENST00000496896 HCN2Q9UL51 889 aa8.66□□□□□ -1.02
TRIM4-205ENST00000496896 DCDC2BA2VCK2 349 aa8.65□□□□□ -1.02
TRIM4-205ENST00000496896 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.02
TRIM4-205ENST00000496896 IER5Q5VY09 327 aa8.65□□□□□ -1.02
TRIM4-205ENST00000496896 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
TRIM4-205ENST00000496896 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
TRIM4-205ENST00000496896 KCNQ4P56696 695 aa8.64□□□□□ -1.03
TRIM4-205ENST00000496896 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
TRIM4-205ENST00000496896 SUSD3Q96L08 255 aa8.64□□□□□ -1.03
TRIM4-205ENST00000496896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRIM4-205ENST00000496896 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
TRIM4-205ENST00000496896 STK32AQ8WU08 396 aa8.63□□□□□ -1.03
TRIM4-205ENST00000496896 CD33P20138 364 aa8.62□□□□□ -1.03
TRIM4-205ENST00000496896 OCLNQ16625 522 aa8.62□□□□□ -1.03
TRIM4-205ENST00000496896 ZNF468Q5VIY5 522 aaPredicted RBP8.62□□□□□ -1.03
TRIM4-205ENST00000496896 MYO19Q96H55 970 aa8.62□□□□□ -1.03
TRIM4-205ENST00000496896 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
TRIM4-205ENST00000496896 GGA1Q9UJY5 639 aa8.62□□□□□ -1.03
TRIM4-205ENST00000496896 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 ADH6P28332 368 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 DGKGP49619 791 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 TYRO3Q06418 890 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
TRIM4-205ENST00000496896 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 HSH2DQ96JZ2 352 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 BTBD6Q96KE9 485 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
TRIM4-205ENST00000496896 TGFBR3LH3BV60 316 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 GATA4P43694 442 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
TRIM4-205ENST00000496896 BRD7Q9NPI1 651 aa8.6□□□□□ -1.03
TRIM4-205ENST00000496896 LGR5O75473 907 aa8.59□□□□□ -1.03
TRIM4-205ENST00000496896 EPXP11678 715 aa8.59□□□□□ -1.03
TRIM4-205ENST00000496896 CEP63Q96MT8 703 aa8.59□□□□□ -1.03
TRIM4-205ENST00000496896 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
TRIM4-205ENST00000496896 FKBP5Q13451 457 aaPredicted RBP8.58□□□□□ -1.04
TRIM4-205ENST00000496896 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
TRIM4-205ENST00000496896 DMGDHQ9UI17 866 aaKnown RBP8.58□□□□□ -1.04
TRIM4-205ENST00000496896 PRR12Q9ULL5 1215 aa8.58□□□□□ -1.04
TRIM4-205ENST00000496896 SIN3BO75182 1162 aa8.57□□□□□ -1.04
TRIM4-205ENST00000496896 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
TRIM4-205ENST00000496896 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
TRIM4-205ENST00000496896 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
TRIM4-205ENST00000496896 ZFP64Q9NPA5 681 aa8.57□□□□□ -1.04
TRIM4-205ENST00000496896 CXXC1Q9P0U4 656 aaPredicted RBP8.57□□□□□ -1.04
TRIM4-205ENST00000496896 KLF15Q9UIH9 416 aa8.57□□□□□ -1.04
TRIM4-205ENST00000496896 KCNH4Q9UQ05 1017 aa8.57□□□□□ -1.04
TRIM4-205ENST00000496896 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
TRIM4-205ENST00000496896 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
TRIM4-205ENST00000496896 PRMT3O60678 531 aa8.56□□□□□ -1.04
TRIM4-205ENST00000496896 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
TRIM4-205ENST00000496896 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
TRIM4-205ENST00000496896 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
TRIM4-205ENST00000496896 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
TRIM4-205ENST00000496896 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
TRIM4-205ENST00000496896 ARTNQ5T4W7 220 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 FCHSD1Q86WN1 690 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 MDFIQ99750 246 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 KRTAP9-9Q9BYP9 154 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 KRTAP9-4Q9BYQ2 154 aa8.55□□□□□ -1.04
TRIM4-205ENST00000496896 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 EPB42P16452 691 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 DGKZQ13574 1117 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 SYT9Q86SS6 491 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 TNFRSF25Q93038 417 aa8.54□□□□□ -1.04
TRIM4-205ENST00000496896 INPP5BP32019 993 aa8.53□□□□□ -1.04
TRIM4-205ENST00000496896 PCBP4P57723 403 aaKnown RBP8.53□□□□□ -1.04
TRIM4-205ENST00000496896 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
TRIM4-205ENST00000496896 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
TRIM4-205ENST00000496896 KLK14Q9P0G3 267 aa8.53□□□□□ -1.04
TRIM4-205ENST00000496896 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
TRIM4-205ENST00000496896 ELOA3DA6NLF2 546 aaPredicted RBP8.52□□□□□ -1.05
TRIM4-205ENST00000496896 SPATA31C1P0DKV0 1188 aa8.52□□□□□ -1.05
TRIM4-205ENST00000496896 ELOA3BQ3SY89 546 aa8.52□□□□□ -1.05
TRIM4-205ENST00000496896 COX20Q5RI15 118 aa8.52□□□□□ -1.05
TRIM4-205ENST00000496896 ELOA3Q8NG57 546 aa8.52□□□□□ -1.05
TRIM4-205ENST00000496896 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.05
TRIM4-205ENST00000496896 MICAL2O94851 1124 aa8.51□□□□□ -1.05
TRIM4-205ENST00000496896 IDH3AP50213 366 aa8.51□□□□□ -1.05
TRIM4-205ENST00000496896 ARSDP51689 593 aa8.51□□□□□ -1.05
TRIM4-205ENST00000496896 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
TRIM4-205ENST00000496896 C16orf46Q6P387 395 aa8.51□□□□□ -1.05
TRIM4-205ENST00000496896 TMEM88BA6NKF7 163 aa8.5□□□□□ -1.05
TRIM4-205ENST00000496896 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
TRIM4-205ENST00000496896 IFT43Q96FT9 208 aa8.5□□□□□ -1.05
TRIM4-205ENST00000496896 SLAIN2Q9P270 581 aa8.5□□□□□ -1.05
TRIM4-205ENST00000496896 DYRK3O43781 588 aa8.49□□□□□ -1.05
TRIM4-205ENST00000496896 ALAS2P22557 587 aa8.49□□□□□ -1.05
TRIM4-205ENST00000496896 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms