RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 NECAB1Q8N987 351 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 RAD50Q92878 1312 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 SEC62Q99442 399 aaKnown RBP14.87□□□□□ -0.03
PDE6B-212ENST00000496514 PPFIA3O75145 1194 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 ZCRB1Q8TBF4 217 aaKnown RBP14.86□□□□□ -0.03
PDE6B-212ENST00000496514 MTX1Q13505 466 aa14.86□□□□□ -0.03
PDE6B-212ENST00000496514 RUFY3Q7L099 469 aa14.86□□□□□ -0.03
PDE6B-212ENST00000496514 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
PDE6B-212ENST00000496514 NCAPD2Q15021 1401 aa14.86□□□□□ -0.03
PDE6B-212ENST00000496514 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
PDE6B-212ENST00000496514 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
PDE6B-212ENST00000496514 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 HSP90AA2PQ14568 343 aaPredicted RBP14.85□□□□□ -0.03
PDE6B-212ENST00000496514 LRP10Q7Z4F1 713 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 SYTL4Q96C24 671 aaPredicted RBP14.85□□□□□ -0.03
PDE6B-212ENST00000496514 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 MRE11P49959 708 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 STK3Q13188 491 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 RNF214Q8ND24 703 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 GPATCH3Q96I76 525 aa14.85□□□□□ -0.03
PDE6B-212ENST00000496514 C5P01031 1676 aa14.84□□□□□ -0.03
PDE6B-212ENST00000496514 GADD45BO75293 160 aaPredicted RBP14.84□□□□□ -0.03
PDE6B-212ENST00000496514 CHMP4AQ9BY43 222 aa14.84□□□□□ -0.03
PDE6B-212ENST00000496514 CWC22Q9HCG8 908 aaKnown RBP14.84□□□□□ -0.03
PDE6B-212ENST00000496514 DBNLQ9UJU6 430 aaKnown RBP14.84□□□□□ -0.03
PDE6B-212ENST00000496514 RBM8AQ9Y5S9 174 aaKnown RBP14.84□□□□□ -0.03
PDE6B-212ENST00000496514 SYCE3A1L190 88 aa14.84□□□□□ -0.03
PDE6B-212ENST00000496514 TIMM10P62072 90 aa14.84□□□□□ -0.03
PDE6B-212ENST00000496514 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.03
PDE6B-212ENST00000496514 SYNE4Q8N205 404 aa14.83□□□□□ -0.03
PDE6B-212ENST00000496514 AOX1Q06278 1338 aa14.83□□□□□ -0.03
PDE6B-212ENST00000496514 KLHL40Q2TBA0 621 aa14.83□□□□□ -0.04
PDE6B-212ENST00000496514 ZSCAN23Q3MJ62 389 aa14.83□□□□□ -0.04
PDE6B-212ENST00000496514 TTC41PQ6P2S7 1318 aa14.83□□□□□ -0.04
PDE6B-212ENST00000496514 ERC1Q8IUD2 1116 aa14.83□□□□□ -0.04
PDE6B-212ENST00000496514 TMEM63CQ9P1W3 806 aa14.83□□□□□ -0.04
PDE6B-212ENST00000496514 SKOR2Q2VWA4 1001 aaPredicted RBP14.82□□□□□ -0.04
PDE6B-212ENST00000496514 LRRC2Q9BYS8 371 aa14.82□□□□□ -0.04
PDE6B-212ENST00000496514 PRIM1P49642 420 aaKnown RBP14.82□□□□□ -0.04
PDE6B-212ENST00000496514 MPNDQ8N594 471 aa14.82□□□□□ -0.04
PDE6B-212ENST00000496514 EVI5LQ96CN4 794 aa14.82□□□□□ -0.04
PDE6B-212ENST00000496514 TAOK2Q9UL54 1235 aa14.82□□□□□ -0.04
PDE6B-212ENST00000496514 ALS2Q96Q42 1657 aa14.82□□□□□ -0.04
PDE6B-212ENST00000496514 FOSBP53539 338 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 ANAPC15P60006 121 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
PDE6B-212ENST00000496514 PDRG1Q9NUG6 133 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 FAM173BQ6P4H8 233 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 TUBGCP6Q96RT7 1819 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 BRD1O95696 1058 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 GPTP24298 496 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 CUL4AQ13619 759 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
PDE6B-212ENST00000496514 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 TNNI3KQ59H18 835 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 FPGT-TNNI3KV9GXZ4 949 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
PDE6B-212ENST00000496514 FIBPO43427 364 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 PAXIP1Q6ZW49 1069 aaPredicted RBP14.8□□□□□ -0.04
PDE6B-212ENST00000496514 RUFY2Q8WXA3 655 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 TTC14Q96N46 770 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 CAMTA1Q9Y6Y1 1673 aa14.8□□□□□ -0.04
PDE6B-212ENST00000496514 A0A0G2JLW4 131 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 FAM177BA6PVY3 158 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 IL2RBP14784 551 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 RFX5P48382 616 aaPredicted RBP14.79□□□□□ -0.04
PDE6B-212ENST00000496514 NASPP49321 788 aaPredicted RBP14.79□□□□□ -0.04
PDE6B-212ENST00000496514 RBSNQ9H1K0 784 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 ERBB4Q15303 1308 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 PHRF1Q9P1Y6 1649 aaKnown RBP14.79□□□□□ -0.04
PDE6B-212ENST00000496514 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 FAM89AQ96GI7 184 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
PDE6B-212ENST00000496514 UTYO14607 1347 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 GOLIM4O00461 696 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 ME3Q16798 604 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 PLBD2Q8NHP8 589 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 MCM2P49736 904 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDE6B-212ENST00000496514 LIMCH1Q9UPQ0 1083 aa14.78□□□□□ -0.04
PDE6B-212ENST00000496514 SLC27A2O14975 620 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 SYT1P21579 422 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 GJB2P29033 226 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 ST3GAL1Q11201 340 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 USP48Q86UV5 1035 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 CYP46A1Q9Y6A2 500 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 KIF1AQ12756 1690 aa14.77□□□□□ -0.04
PDE6B-212ENST00000496514 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms