RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
VTI1A-209ENST00000496445 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
VTI1A-209ENST00000496445 DDX21Q9NR30 783 aaKnown RBP eCLIP18.63■□□□□ 0.57
VTI1A-209ENST00000496445 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
VTI1A-209ENST00000496445 CHPF2Q9P2E5 772 aa18.63■□□□□ 0.57
VTI1A-209ENST00000496445 POTECB2RU33 542 aa18.62■□□□□ 0.57
VTI1A-209ENST00000496445 ALDH1B1P30837 517 aa18.62■□□□□ 0.57
VTI1A-209ENST00000496445 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
VTI1A-209ENST00000496445 PARP10Q53GL7 1025 aa18.62■□□□□ 0.57
VTI1A-209ENST00000496445 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
VTI1A-209ENST00000496445 PCNTO95613 3336 aa18.61■□□□□ 0.57
VTI1A-209ENST00000496445 HOXA10P31260 410 aaPredicted RBP18.61■□□□□ 0.57
VTI1A-209ENST00000496445 FKBP4Q02790 459 aaKnown RBP eCLIP18.61■□□□□ 0.57
VTI1A-209ENST00000496445 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
VTI1A-209ENST00000496445 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
VTI1A-209ENST00000496445 COL4A5P29400 1685 aa18.6■□□□□ 0.57
VTI1A-209ENST00000496445 APLP1P51693 650 aa18.6■□□□□ 0.57
VTI1A-209ENST00000496445 FSTL1Q12841 308 aa18.6■□□□□ 0.57
VTI1A-209ENST00000496445 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
VTI1A-209ENST00000496445 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
VTI1A-209ENST00000496445 SCN4AP35499 1836 aa18.59■□□□□ 0.57
VTI1A-209ENST00000496445 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
VTI1A-209ENST00000496445 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
VTI1A-209ENST00000496445 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
VTI1A-209ENST00000496445 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
VTI1A-209ENST00000496445 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
VTI1A-209ENST00000496445 TAF1P21675 1872 aa18.58■□□□□ 0.57
VTI1A-209ENST00000496445 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
VTI1A-209ENST00000496445 HSP90AB3PQ58FF7 597 aa18.58■□□□□ 0.56
VTI1A-209ENST00000496445 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.56
VTI1A-209ENST00000496445 RTKN2Q8IZC4 609 aa18.58■□□□□ 0.56
VTI1A-209ENST00000496445 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
VTI1A-209ENST00000496445 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
VTI1A-209ENST00000496445 SLC10A5Q5PT55 438 aa18.57■□□□□ 0.56
VTI1A-209ENST00000496445 RBM17Q96I25 401 aaKnown RBP18.57■□□□□ 0.56
VTI1A-209ENST00000496445 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
VTI1A-209ENST00000496445 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
VTI1A-209ENST00000496445 GNAI1P63096 354 aa18.56■□□□□ 0.56
VTI1A-209ENST00000496445 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
VTI1A-209ENST00000496445 SMC1BQ8NDV3 1235 aa18.56■□□□□ 0.56
VTI1A-209ENST00000496445 CRAMP1Q96RY5 1269 aa18.56■□□□□ 0.56
VTI1A-209ENST00000496445 ABCC4O15439 1325 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 LRRC37AA6NMS7 1700 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
VTI1A-209ENST00000496445 PPEF1O14829 653 aaPredicted RBP18.55■□□□□ 0.56
VTI1A-209ENST00000496445 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
VTI1A-209ENST00000496445 HTRA3P83110 453 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 PLBD2Q8NHP8 589 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 NLRP3Q96P20 1036 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 PSMD1Q99460 953 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 ADAMTSL1Q8N6G6 1762 aa18.55■□□□□ 0.56
VTI1A-209ENST00000496445 COL4A1P02462 1669 aa18.54■□□□□ 0.56
VTI1A-209ENST00000496445 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
VTI1A-209ENST00000496445 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
VTI1A-209ENST00000496445 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
VTI1A-209ENST00000496445 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
VTI1A-209ENST00000496445 CC2D2BQ6DHV5 1058 aa18.53■□□□□ 0.56
VTI1A-209ENST00000496445 ANKRD13DQ6ZTN6 518 aa18.53■□□□□ 0.56
VTI1A-209ENST00000496445 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
VTI1A-209ENST00000496445 L3MBTL3Q96JM7 780 aaPredicted RBP18.53■□□□□ 0.56
VTI1A-209ENST00000496445 ISCA1Q9BUE6 129 aa18.53■□□□□ 0.56
VTI1A-209ENST00000496445 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
VTI1A-209ENST00000496445 TRMT112Q9UI30 125 aaKnown RBP18.53■□□□□ 0.56
VTI1A-209ENST00000496445 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
VTI1A-209ENST00000496445 LTBP1Q14766 1721 aa18.52■□□□□ 0.56
VTI1A-209ENST00000496445 FZD9O00144 591 aa18.52■□□□□ 0.56
VTI1A-209ENST00000496445 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
VTI1A-209ENST00000496445 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
VTI1A-209ENST00000496445 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
VTI1A-209ENST00000496445 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
VTI1A-209ENST00000496445 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
VTI1A-209ENST00000496445 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
VTI1A-209ENST00000496445 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
VTI1A-209ENST00000496445 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
VTI1A-209ENST00000496445 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
VTI1A-209ENST00000496445 ATP6V0A2Q9Y487 856 aa18.5■□□□□ 0.55
VTI1A-209ENST00000496445 GRIPAP1Q4V328 841 aa18.49■□□□□ 0.55
VTI1A-209ENST00000496445 TSPYL6Q8N831 410 aa18.49■□□□□ 0.55
VTI1A-209ENST00000496445 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
VTI1A-209ENST00000496445 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
VTI1A-209ENST00000496445 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
VTI1A-209ENST00000496445 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
VTI1A-209ENST00000496445 ANP32CO43423 234 aa18.47■□□□□ 0.55
VTI1A-209ENST00000496445 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
VTI1A-209ENST00000496445 TAF1DQ9H5J8 278 aaPredicted RBP18.47■□□□□ 0.55
VTI1A-209ENST00000496445 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
VTI1A-209ENST00000496445 GRAPQ13588 217 aa18.46■□□□□ 0.55
VTI1A-209ENST00000496445 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
VTI1A-209ENST00000496445 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
VTI1A-209ENST00000496445 JDP2Q8WYK2 163 aa18.46■□□□□ 0.55
VTI1A-209ENST00000496445 KLRG1Q96E93 195 aa18.46■□□□□ 0.55
VTI1A-209ENST00000496445 BBOX1O75936 387 aa18.45■□□□□ 0.54
VTI1A-209ENST00000496445 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
VTI1A-209ENST00000496445 RIC3Q7Z5B4 369 aa18.45■□□□□ 0.54
VTI1A-209ENST00000496445 GPC2Q8N158 579 aa18.45■□□□□ 0.54
VTI1A-209ENST00000496445 LARGE2Q8N3Y3 721 aa18.45■□□□□ 0.54
VTI1A-209ENST00000496445 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
VTI1A-209ENST00000496445 AOC3Q16853 763 aa18.44■□□□□ 0.54
VTI1A-209ENST00000496445 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
VTI1A-209ENST00000496445 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms