RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 TPCN1Q9ULQ1 816 aa24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 CCDC112Q8NEF3 446 aa24.31■■□□□ 1.48
LYSMD4-209ENST00000496108 DDX41Q9UJV9 622 aaKnown RBP24.31■■□□□ 1.48
LYSMD4-209ENST00000496108 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
LYSMD4-209ENST00000496108 PSMA5P28066 241 aa24.31■■□□□ 1.48
LYSMD4-209ENST00000496108 HDGFP51858 240 aaKnown RBP24.31■■□□□ 1.48
LYSMD4-209ENST00000496108 NECAB1Q8N987 351 aa24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 ALDH8A1Q9H2A2 487 aaPredicted RBP24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 ECHDC1Q9NTX5 307 aa24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 GOLGA6L4A6NEF3 574 aa24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 ANKRD1Q15327 319 aa24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 GPATCH3Q96I76 525 aa24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
LYSMD4-209ENST00000496108 MTX1Q13505 466 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 CKAP2LQ8IYA6 745 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 CLASRPQ8N2M8 674 aaKnown RBP24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 EVI5LQ96CN4 794 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 SPATA32Q96LK8 384 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 NRBP1Q9UHY1 535 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 IL17REQ8NFR9 667 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 SNRKQ9NRH2 765 aa24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 MORC2Q9Y6X9 1032 aaPredicted RBP24.29■■□□□ 1.48
LYSMD4-209ENST00000496108 LEO1Q8WVC0 666 aaPredicted RBP24.28■■□□□ 1.48
LYSMD4-209ENST00000496108 RBM8AQ9Y5S9 174 aaKnown RBP24.28■■□□□ 1.48
LYSMD4-209ENST00000496108 HIP1O00291 1037 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 NEMFO60524 1076 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 ZNF165P49910 485 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 BEND3Q5T5X7 828 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 MAP4K1Q92918 833 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 CLIP2Q9UDT6 1046 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 TNRQ92752 1358 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 SOX12O15370 315 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 HSPA2P54652 639 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 FERMT3Q86UX7 667 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 CHMP3Q9Y3E7 222 aa24.27■■□□□ 1.48
LYSMD4-209ENST00000496108 GIGYF1O75420 1035 aaPredicted RBP24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 AMPHP49418 695 aa24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 SARM1Q6SZW1 724 aa24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 CACTINQ8WUQ7 758 aaKnown RBP24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 CHMP4AQ9BY43 222 aa24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 TPD52L1Q16890 204 aaPredicted RBP24.26■■□□□ 1.47
LYSMD4-209ENST00000496108 HOXB7P09629 217 aa24.25■■□□□ 1.47
LYSMD4-209ENST00000496108 OS9Q13438 667 aaPredicted RBP24.25■■□□□ 1.47
LYSMD4-209ENST00000496108 ERC1Q8IUD2 1116 aa24.25■■□□□ 1.47
LYSMD4-209ENST00000496108 DNAAF4Q8WXU2 420 aa24.25■■□□□ 1.47
LYSMD4-209ENST00000496108 FAM173BQ6P4H8 233 aa24.25■■□□□ 1.47
LYSMD4-209ENST00000496108 DTNBO60941 627 aa24.24■■□□□ 1.47
LYSMD4-209ENST00000496108 RBM6P78332 1123 aaKnown RBP24.24■■□□□ 1.47
LYSMD4-209ENST00000496108 CEP135Q66GS9 1140 aa24.24■■□□□ 1.47
LYSMD4-209ENST00000496108 SLC27A2O14975 620 aa24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 KIF18AQ8NI77 898 aa24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 RNF20Q5VTR2 975 aa24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 ZNF771Q7L3S4 317 aaPredicted RBP24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 MRFAP1L1Q96HT8 127 aa24.23■■□□□ 1.47
LYSMD4-209ENST00000496108 KCNJ4P48050 445 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 BLOC1S2Q6QNY1 142 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 DNAJC25Q9H1X3 360 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 NR1I2O75469 434 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 CCDC144BQ3MJ40 725 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 CCDC144CPQ8IYA2 1237 aa24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 ZNF397Q8NF99 534 aaPredicted RBP24.22■■□□□ 1.47
LYSMD4-209ENST00000496108 IFIT2P09913 472 aaKnown RBP24.21■■□□□ 1.47
LYSMD4-209ENST00000496108 RPS6KB1P23443 525 aa24.21■■□□□ 1.47
LYSMD4-209ENST00000496108 LARP1Q6PKG0 1096 aaKnown RBP24.21■■□□□ 1.47
LYSMD4-209ENST00000496108 LRRC8AQ8IWT6 810 aa24.21■■□□□ 1.47
LYSMD4-209ENST00000496108 PGBD1Q96JS3 809 aa24.2■■□□□ 1.47
LYSMD4-209ENST00000496108 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
LYSMD4-209ENST00000496108 NYAP1Q6ZVC0 841 aa24.2■■□□□ 1.46
LYSMD4-209ENST00000496108 BICD2Q8TD16 824 aa24.2■■□□□ 1.46
LYSMD4-209ENST00000496108 TFIP11Q9UBB9 837 aaKnown RBP24.2■■□□□ 1.46
LYSMD4-209ENST00000496108 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
LYSMD4-209ENST00000496108 SLFN14P0C7P3 912 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 IQCB1Q15051 598 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 PI4KAP2A4QPH2 592 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 TSGA10IPQ3SY00 556 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 PI4KAP1Q8N8J0 262 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 DDX54Q8TDD1 881 aaKnown RBP24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 KCND1Q9NSA2 647 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 HMG20BQ9P0W2 317 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 JCADQ9P266 1359 aa24.19■■□□□ 1.46
LYSMD4-209ENST00000496108 MED1Q15648 1581 aaPredicted RBP24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 NMIQ13287 307 aaPredicted RBP24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 TOB2Q14106 344 aaPredicted RBP24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 SLFNL1Q499Z3 407 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 KRT222Q8N1A0 295 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 HDAC5Q9UQL6 1122 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 GOLGA6L19H0YKK7 550 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 NAA30Q147X3 362 aaPredicted RBP24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 FAM53CQ9NYF3 392 aa24.18■■□□□ 1.46
LYSMD4-209ENST00000496108 CTAGE5O15320 804 aa24.17■■□□□ 1.46
LYSMD4-209ENST00000496108 IGSF3O75054 1194 aa24.17■■□□□ 1.46
LYSMD4-209ENST00000496108 RESTQ13127 1097 aa24.17■■□□□ 1.46
LYSMD4-209ENST00000496108 FAM227BQ96M60 508 aa24.17■■□□□ 1.46
LYSMD4-209ENST00000496108 MED23Q9ULK4 1368 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms