RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 MAP3K2Q9Y2U5 619 aa18.94■□□□□ 0.62
GAPDH-210ENST00000496049 KDM2BQ8NHM5 1336 aa18.94■□□□□ 0.62
GAPDH-210ENST00000496049 BCORQ6W2J9 1755 aa18.93■□□□□ 0.62
GAPDH-210ENST00000496049 C10orf71Q711Q0 1435 aa18.93■□□□□ 0.62
GAPDH-210ENST00000496049 SCN7AQ01118 1682 aa18.93■□□□□ 0.62
GAPDH-210ENST00000496049 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
GAPDH-210ENST00000496049 TMEM57Q8N5G2 664 aa18.93■□□□□ 0.62
GAPDH-210ENST00000496049 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
GAPDH-210ENST00000496049 RTCBQ9Y3I0 505 aaKnown RBP18.93■□□□□ 0.62
GAPDH-210ENST00000496049 F6X3S4 739 aa18.92■□□□□ 0.62
GAPDH-210ENST00000496049 RLBP1P12271 317 aa18.92■□□□□ 0.62
GAPDH-210ENST00000496049 DZIP3Q86Y13 1208 aaKnown RBP18.92■□□□□ 0.62
GAPDH-210ENST00000496049 TNNQ9UQP3 1299 aa18.92■□□□□ 0.62
GAPDH-210ENST00000496049 COG6Q9Y2V7 657 aa18.92■□□□□ 0.62
GAPDH-210ENST00000496049 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
GAPDH-210ENST00000496049 ARFGEF1Q9Y6D6 1849 aa18.92■□□□□ 0.62
GAPDH-210ENST00000496049 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 RPS6KA4O75676 772 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 ADRA2BP18089 450 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 AAMPQ13685 434 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
GAPDH-210ENST00000496049 MAP3K15Q6ZN16 1313 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
GAPDH-210ENST00000496049 A0A0G2JLW4 131 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 FOXN1O15353 648 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 TTLL7Q6ZT98 887 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
GAPDH-210ENST00000496049 SBF1O95248 1867 aa18.89■□□□□ 0.61
GAPDH-210ENST00000496049 ERVV-1B6SEH8 477 aa18.89■□□□□ 0.61
GAPDH-210ENST00000496049 METTL22Q9BUU2 404 aaPredicted RBP18.89■□□□□ 0.61
GAPDH-210ENST00000496049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
GAPDH-210ENST00000496049 ALDH1L1O75891 902 aa18.88■□□□□ 0.61
GAPDH-210ENST00000496049 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
GAPDH-210ENST00000496049 RGL2O15211 777 aa18.87■□□□□ 0.61
GAPDH-210ENST00000496049 SSFA2P28290 1259 aa18.87■□□□□ 0.61
GAPDH-210ENST00000496049 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
GAPDH-210ENST00000496049 MYD88Q99836 296 aa18.87■□□□□ 0.61
GAPDH-210ENST00000496049 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
GAPDH-210ENST00000496049 IBTKQ9P2D0 1353 aaPredicted RBP18.87■□□□□ 0.61
GAPDH-210ENST00000496049 NUP98P52948 1817 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 ZPR1O75312 459 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 RFC4P35249 363 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 TRAPPC3LQ5T215 181 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 BEND3Q5T5X7 828 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
GAPDH-210ENST00000496049 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
GAPDH-210ENST00000496049 MKRN1Q9UHC7 482 aaKnown RBP18.85■□□□□ 0.61
GAPDH-210ENST00000496049 MMP10P09238 476 aa18.84■□□□□ 0.61
GAPDH-210ENST00000496049 PRDM10Q9NQV6 1147 aa18.84■□□□□ 0.61
GAPDH-210ENST00000496049 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
GAPDH-210ENST00000496049 CAMTA2O94983 1202 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 GNAI3P08754 354 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 DPEP1P16444 411 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
GAPDH-210ENST00000496049 TCIRG1Q13488 830 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
GAPDH-210ENST00000496049 USP42Q9H9J4 1324 aaKnown RBP18.82■□□□□ 0.6
GAPDH-210ENST00000496049 NEURL1BA8MQ27 555 aa18.82■□□□□ 0.6
GAPDH-210ENST00000496049 TGFB2P61812 414 aa18.82■□□□□ 0.6
GAPDH-210ENST00000496049 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
GAPDH-210ENST00000496049 CWC25Q9NXE8 425 aaPredicted RBP18.82■□□□□ 0.6
GAPDH-210ENST00000496049 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
GAPDH-210ENST00000496049 UBTFL1P0CB47 393 aaPredicted RBP18.81■□□□□ 0.6
GAPDH-210ENST00000496049 CWF19L2Q2TBE0 894 aaKnown RBP18.81■□□□□ 0.6
GAPDH-210ENST00000496049 CCDC191Q8NCU4 936 aa18.81■□□□□ 0.6
GAPDH-210ENST00000496049 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
GAPDH-210ENST00000496049 PDE4DIPQ5VU43 2346 aa18.81■□□□□ 0.6
GAPDH-210ENST00000496049 ATP5J2-PTCD1G3V325 749 aa18.8■□□□□ 0.6
GAPDH-210ENST00000496049 ZBTB7BO15156 539 aaPredicted RBP18.8■□□□□ 0.6
GAPDH-210ENST00000496049 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
GAPDH-210ENST00000496049 GRM8O00222 908 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
GAPDH-210ENST00000496049 GCKRQ14397 625 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 HLFQ16534 295 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 MEIS3Q99687 375 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
GAPDH-210ENST00000496049 GNAI2P04899 355 aa18.78■□□□□ 0.6
GAPDH-210ENST00000496049 CTCFP49711 727 aaPredicted RBP18.78■□□□□ 0.6
GAPDH-210ENST00000496049 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
GAPDH-210ENST00000496049 GPTP24298 496 aa18.77■□□□□ 0.6
GAPDH-210ENST00000496049 SRP68Q9UHB9 627 aaKnown RBP18.77■□□□□ 0.6
GAPDH-210ENST00000496049 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
GAPDH-210ENST00000496049 LBX1P52954 281 aa18.76■□□□□ 0.59
GAPDH-210ENST00000496049 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
GAPDH-210ENST00000496049 ZNF34Q8IZ26 560 aa18.76■□□□□ 0.59
GAPDH-210ENST00000496049 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
GAPDH-210ENST00000496049 UTYO14607 1347 aa18.75■□□□□ 0.59
GAPDH-210ENST00000496049 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
GAPDH-210ENST00000496049 TIAM2Q8IVF5 1701 aa18.75■□□□□ 0.59
GAPDH-210ENST00000496049 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
GAPDH-210ENST00000496049 CCDC136Q96JN2 1154 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms