RNA–Protein interactions for RNA: ENST00000495099.2

HDAC11-219, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 198 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-219ENST00000495099 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
HDAC11-219ENST00000495099 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
HDAC11-219ENST00000495099 FMNL2Q96PY5 1086 aa16.1■□□□□ 0.17
HDAC11-219ENST00000495099 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
HDAC11-219ENST00000495099 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
HDAC11-219ENST00000495099 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
HDAC11-219ENST00000495099 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
HDAC11-219ENST00000495099 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
HDAC11-219ENST00000495099 A0A087WZG4 1122 aa16.08■□□□□ 0.16
HDAC11-219ENST00000495099 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
HDAC11-219ENST00000495099 CCDC93Q567U6 631 aa16.08■□□□□ 0.16
HDAC11-219ENST00000495099 OLFM4Q6UX06 510 aa16.08■□□□□ 0.16
HDAC11-219ENST00000495099 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
HDAC11-219ENST00000495099 HHIPL1Q96JK4 782 aa16.08■□□□□ 0.16
HDAC11-219ENST00000495099 TEX13AQ9BXU3 409 aaPredicted RBP16.08■□□□□ 0.16
HDAC11-219ENST00000495099 RNF186Q9NXI6 227 aa16.08■□□□□ 0.16
HDAC11-219ENST00000495099 FZD9O00144 591 aa16.07■□□□□ 0.16
HDAC11-219ENST00000495099 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
HDAC11-219ENST00000495099 GLIS2Q9BZE0 524 aaPredicted RBP16.07■□□□□ 0.16
HDAC11-219ENST00000495099 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
HDAC11-219ENST00000495099 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
HDAC11-219ENST00000495099 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
HDAC11-219ENST00000495099 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
HDAC11-219ENST00000495099 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
HDAC11-219ENST00000495099 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
HDAC11-219ENST00000495099 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
HDAC11-219ENST00000495099 IARSP41252 1262 aaKnown RBP16.05■□□□□ 0.16
HDAC11-219ENST00000495099 SCNN1DP51172 638 aa16.05■□□□□ 0.16
HDAC11-219ENST00000495099 STYK1Q6J9G0 422 aa16.05■□□□□ 0.16
HDAC11-219ENST00000495099 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
HDAC11-219ENST00000495099 COL6A3P12111 3177 aa16.05■□□□□ 0.16
HDAC11-219ENST00000495099 NPHP1O15259 732 aa16.04■□□□□ 0.16
HDAC11-219ENST00000495099 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
HDAC11-219ENST00000495099 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-219ENST00000495099 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
HDAC11-219ENST00000495099 PAPPA2Q9BXP8 1791 aa16.03■□□□□ 0.16
HDAC11-219ENST00000495099 SRGNP10124 158 aa16.03■□□□□ 0.16
HDAC11-219ENST00000495099 HUNKP57058 714 aa16.03■□□□□ 0.16
HDAC11-219ENST00000495099 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
HDAC11-219ENST00000495099 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
HDAC11-219ENST00000495099 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
HDAC11-219ENST00000495099 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
HDAC11-219ENST00000495099 EIF6P56537 245 aaKnown RBP16.02■□□□□ 0.16
HDAC11-219ENST00000495099 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.16
HDAC11-219ENST00000495099 MASTLQ96GX5 879 aa16.02■□□□□ 0.16
HDAC11-219ENST00000495099 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
HDAC11-219ENST00000495099 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
HDAC11-219ENST00000495099 COL4A5P29400 1685 aa16.02■□□□□ 0.15
HDAC11-219ENST00000495099 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
HDAC11-219ENST00000495099 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
HDAC11-219ENST00000495099 CEP290O15078 2479 aa16■□□□□ 0.15
HDAC11-219ENST00000495099 FAM155AB1AL88 458 aaPredicted RBP16■□□□□ 0.15
HDAC11-219ENST00000495099 NBPF26B4DH59 902 aa16■□□□□ 0.15
HDAC11-219ENST00000495099 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
HDAC11-219ENST00000495099 PKN2Q16513 984 aaKnown RBP16■□□□□ 0.15
HDAC11-219ENST00000495099 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
HDAC11-219ENST00000495099 CNBD1Q8NA66 436 aa16■□□□□ 0.15
HDAC11-219ENST00000495099 POTEFA5A3E0 1075 aa15.99■□□□□ 0.15
HDAC11-219ENST00000495099 NEFMP07197 916 aa15.99■□□□□ 0.15
HDAC11-219ENST00000495099 POLR2AP24928 1970 aaKnown RBP15.98■□□□□ 0.15
HDAC11-219ENST00000495099 DLK2Q6UY11 383 aa15.98■□□□□ 0.15
HDAC11-219ENST00000495099 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
HDAC11-219ENST00000495099 ST5P78524 1137 aa15.97■□□□□ 0.15
HDAC11-219ENST00000495099 RGMBQ6NW40 437 aa15.97■□□□□ 0.15
HDAC11-219ENST00000495099 NBPF5PQ86XG9 351 aaPredicted RBP15.97■□□□□ 0.15
HDAC11-219ENST00000495099 HLFQ16534 295 aa15.96■□□□□ 0.15
HDAC11-219ENST00000495099 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
HDAC11-219ENST00000495099 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
HDAC11-219ENST00000495099 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
HDAC11-219ENST00000495099 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
HDAC11-219ENST00000495099 KIAA0100Q14667 2235 aaKnown RBP15.95■□□□□ 0.14
HDAC11-219ENST00000495099 ZNF157P51786 506 aaPredicted RBP15.95■□□□□ 0.14
HDAC11-219ENST00000495099 NFE2L2Q16236 605 aa15.95■□□□□ 0.14
HDAC11-219ENST00000495099 ZNF296Q8WUU4 475 aaPredicted RBP15.95■□□□□ 0.14
HDAC11-219ENST00000495099 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
HDAC11-219ENST00000495099 ADARB2Q9NS39 739 aaKnown RBP15.95■□□□□ 0.14
HDAC11-219ENST00000495099 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
HDAC11-219ENST00000495099 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
HDAC11-219ENST00000495099 RBBP6Q7Z6E9 1792 aaKnown RBP15.95■□□□□ 0.14
HDAC11-219ENST00000495099 MYL6BP14649 208 aa15.94■□□□□ 0.14
HDAC11-219ENST00000495099 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
HDAC11-219ENST00000495099 FBXO46Q6PJ61 603 aaPredicted RBP15.94■□□□□ 0.14
HDAC11-219ENST00000495099 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
HDAC11-219ENST00000495099 NUP98P52948 1817 aa15.94■□□□□ 0.14
HDAC11-219ENST00000495099 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
HDAC11-219ENST00000495099 DDX10Q13206 875 aaKnown RBP15.93■□□□□ 0.14
HDAC11-219ENST00000495099 CLEC4GQ6UXB4 293 aa15.93■□□□□ 0.14
HDAC11-219ENST00000495099 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
HDAC11-219ENST00000495099 TTLL7Q6ZT98 887 aa15.92■□□□□ 0.14
HDAC11-219ENST00000495099 USP48Q86UV5 1035 aa15.92■□□□□ 0.14
HDAC11-219ENST00000495099 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
HDAC11-219ENST00000495099 GPRC5DQ9NZD1 345 aa15.92■□□□□ 0.14
HDAC11-219ENST00000495099 CENPFP49454 3210 aa15.91■□□□□ 0.14
HDAC11-219ENST00000495099 TBC1D8O95759 1140 aa15.91■□□□□ 0.14
HDAC11-219ENST00000495099 NPR1P16066 1061 aa15.91■□□□□ 0.14
HDAC11-219ENST00000495099 GTF2E1P29083 439 aaPredicted RBP15.91■□□□□ 0.14
HDAC11-219ENST00000495099 CDC37L1Q7L3B6 337 aa15.91■□□□□ 0.14
HDAC11-219ENST00000495099 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
HDAC11-219ENST00000495099 GPTP24298 496 aa15.9■□□□□ 0.14
HDAC11-219ENST00000495099 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms