RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 DALRD3Q5D0E6 543 aaKnown RBP21.99■■□□□ 1.11
SNX17-209ENST00000494893 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
SNX17-209ENST00000494893 RIC3Q7Z5B4 369 aa21.99■■□□□ 1.11
SNX17-209ENST00000494893 FLIIQ13045 1269 aa21.98■■□□□ 1.11
SNX17-209ENST00000494893 PPP1R42Q7Z4L9 355 aa21.98■■□□□ 1.11
SNX17-209ENST00000494893 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
SNX17-209ENST00000494893 PDZRN3Q9UPQ7 1066 aa21.98■■□□□ 1.11
SNX17-209ENST00000494893 PI4KAP2A4QPH2 592 aa21.97■■□□□ 1.11
SNX17-209ENST00000494893 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
SNX17-209ENST00000494893 HNRNPUQ00839 825 aaKnown RBP eCLIP21.97■■□□□ 1.11
SNX17-209ENST00000494893 TRIM28Q13263 835 aaKnown RBP21.97■■□□□ 1.11
SNX17-209ENST00000494893 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
SNX17-209ENST00000494893 PI4KAP1Q8N8J0 262 aa21.97■■□□□ 1.11
SNX17-209ENST00000494893 MYD88Q99836 296 aa21.97■■□□□ 1.11
SNX17-209ENST00000494893 MAP3K2Q9Y2U5 619 aa21.97■■□□□ 1.11
SNX17-209ENST00000494893 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
SNX17-209ENST00000494893 SLC10A5Q5PT55 438 aa21.96■■□□□ 1.11
SNX17-209ENST00000494893 TTLL6Q8N841 843 aa21.96■■□□□ 1.11
SNX17-209ENST00000494893 ZNF622Q969S3 477 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNX17-209ENST00000494893 METTL22Q9BUU2 404 aaPredicted RBP21.96■■□□□ 1.11
SNX17-209ENST00000494893 DDX58O95786 925 aaKnown RBP21.95■■□□□ 1.1
SNX17-209ENST00000494893 CRY2Q49AN0 593 aa21.95■■□□□ 1.1
SNX17-209ENST00000494893 STYK1Q6J9G0 422 aa21.95■■□□□ 1.1
SNX17-209ENST00000494893 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
SNX17-209ENST00000494893 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
SNX17-209ENST00000494893 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
SNX17-209ENST00000494893 RNF123Q5XPI4 1314 aa21.94■■□□□ 1.1
SNX17-209ENST00000494893 NPR1P16066 1061 aa21.93■■□□□ 1.1
SNX17-209ENST00000494893 SH3TC1Q8TE82 1336 aa21.92■■□□□ 1.1
SNX17-209ENST00000494893 HCLS1P14317 486 aaPredicted RBP21.92■■□□□ 1.1
SNX17-209ENST00000494893 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
SNX17-209ENST00000494893 YY1P25490 414 aa21.91■■□□□ 1.1
SNX17-209ENST00000494893 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
SNX17-209ENST00000494893 PRPF40BQ6NWY9 871 aaKnown RBP21.91■■□□□ 1.1
SNX17-209ENST00000494893 ARHGAP27Q6ZUM4 889 aa21.91■■□□□ 1.1
SNX17-209ENST00000494893 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
SNX17-209ENST00000494893 SSH1Q8WYL5 1049 aa21.91■■□□□ 1.1
SNX17-209ENST00000494893 SLX4Q8IY92 1834 aa21.91■■□□□ 1.1
SNX17-209ENST00000494893 DDX60Q8IY21 1712 aaKnown RBP21.9■■□□□ 1.1
SNX17-209ENST00000494893 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
SNX17-209ENST00000494893 CCDC191Q8NCU4 936 aa21.9■■□□□ 1.1
SNX17-209ENST00000494893 CNKSR1Q969H4 720 aa21.9■■□□□ 1.1
SNX17-209ENST00000494893 CHD4Q14839 1912 aa21.89■■□□□ 1.09
SNX17-209ENST00000494893 F6X3S4 739 aa21.89■■□□□ 1.09
SNX17-209ENST00000494893 CWF19L2Q2TBE0 894 aaKnown RBP21.89■■□□□ 1.09
SNX17-209ENST00000494893 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
SNX17-209ENST00000494893 SLC51AQ86UW1 340 aa21.89■■□□□ 1.09
SNX17-209ENST00000494893 C7orf43Q8WVR3 580 aa21.89■■□□□ 1.09
SNX17-209ENST00000494893 JARID2Q92833 1246 aaPredicted RBP21.89■■□□□ 1.09
SNX17-209ENST00000494893 LAMB2P55268 1798 aa21.89■■□□□ 1.09
SNX17-209ENST00000494893 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 NEURL1BA8MQ27 555 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 C21orf2O43822 256 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 PRELPP51888 382 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 DNAAF4Q8WXU2 420 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 NLRP3Q96P20 1036 aa21.88■■□□□ 1.09
SNX17-209ENST00000494893 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
SNX17-209ENST00000494893 ZNF219Q9P2Y4 722 aaPredicted RBP21.88■■□□□ 1.09
SNX17-209ENST00000494893 NFKBIEO00221 500 aa21.87■■□□□ 1.09
SNX17-209ENST00000494893 ZBTB38Q8NAP3 1195 aaPredicted RBP21.87■■□□□ 1.09
SNX17-209ENST00000494893 BCL2L13Q9BXK5 485 aa21.87■■□□□ 1.09
SNX17-209ENST00000494893 ZBED9Q6R2W3 1325 aa21.86■■□□□ 1.09
SNX17-209ENST00000494893 CACNA1SQ13698 1873 aa21.86■■□□□ 1.09
SNX17-209ENST00000494893 PCCAP05165 728 aaPredicted RBP21.86■■□□□ 1.09
SNX17-209ENST00000494893 RASSF7Q02833 373 aa21.86■■□□□ 1.09
SNX17-209ENST00000494893 OLFM4Q6UX06 510 aa21.86■■□□□ 1.09
SNX17-209ENST00000494893 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
SNX17-209ENST00000494893 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
SNX17-209ENST00000494893 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
SNX17-209ENST00000494893 SNED1Q8TER0 1413 aa21.85■■□□□ 1.09
SNX17-209ENST00000494893 COL4A1P02462 1669 aa21.85■■□□□ 1.09
SNX17-209ENST00000494893 CT47B1P0C2W7 299 aaPredicted RBP21.84■■□□□ 1.09
SNX17-209ENST00000494893 NEXNQ0ZGT2 675 aa21.84■■□□□ 1.09
SNX17-209ENST00000494893 ALDH1L2Q3SY69 923 aa21.84■■□□□ 1.09
SNX17-209ENST00000494893 BEND3Q5T5X7 828 aa21.84■■□□□ 1.09
SNX17-209ENST00000494893 ABCC4O15439 1325 aa21.83■■□□□ 1.09
SNX17-209ENST00000494893 ALDH1B1P30837 517 aa21.83■■□□□ 1.09
SNX17-209ENST00000494893 LINS1Q8NG48 757 aa21.83■■□□□ 1.09
SNX17-209ENST00000494893 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
SNX17-209ENST00000494893 H7C1W4 665 aa21.82■■□□□ 1.08
SNX17-209ENST00000494893 CASP7P55210 303 aa21.82■■□□□ 1.08
SNX17-209ENST00000494893 GCKRQ14397 625 aa21.82■■□□□ 1.08
SNX17-209ENST00000494893 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
SNX17-209ENST00000494893 CDHR2Q9BYE9 1310 aa21.81■■□□□ 1.08
SNX17-209ENST00000494893 RARSP54136 660 aaKnown RBP21.81■■□□□ 1.08
SNX17-209ENST00000494893 SMC4Q9NTJ3 1288 aa21.81■■□□□ 1.08
SNX17-209ENST00000494893 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
SNX17-209ENST00000494893 C9orf131Q5VYM1 1079 aa21.8■■□□□ 1.08
SNX17-209ENST00000494893 UBE3BQ7Z3V4 1068 aa21.79■■□□□ 1.08
SNX17-209ENST00000494893 PTPRCP08575 1304 aa21.79■■□□□ 1.08
SNX17-209ENST00000494893 PDE8AO60658 829 aa21.78■■□□□ 1.08
SNX17-209ENST00000494893 BRPF1P55201 1214 aaPredicted RBP21.78■■□□□ 1.08
SNX17-209ENST00000494893 CCDC93Q567U6 631 aa21.78■■□□□ 1.08
SNX17-209ENST00000494893 ZNF784Q8NCA9 323 aaPredicted RBP21.78■■□□□ 1.08
SNX17-209ENST00000494893 LTBP3Q9NS15 1303 aa21.78■■□□□ 1.08
SNX17-209ENST00000494893 SBF1O95248 1867 aa21.77■■□□□ 1.08
SNX17-209ENST00000494893 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
SNX17-209ENST00000494893 GRAPQ13588 217 aa21.77■■□□□ 1.08
SNX17-209ENST00000494893 DDX46Q7L014 1031 aaKnown RBP21.77■■□□□ 1.08
SNX17-209ENST00000494893 GRAPLQ8TC17 118 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms