RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
SDF4-207ENST00000494748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.25■□□□□ 0.51
SDF4-207ENST00000494748 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
SDF4-207ENST00000494748 OGFRQ9NZT2 677 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
SDF4-207ENST00000494748 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 PGBD1Q96JS3 809 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 DIP2AQ14689 1571 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 JCADQ9P266 1359 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
SDF4-207ENST00000494748 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
SDF4-207ENST00000494748 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
SDF4-207ENST00000494748 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
SDF4-207ENST00000494748 LAMA4Q16363 1823 aa18.23■□□□□ 0.51
SDF4-207ENST00000494748 IGSF3O75054 1194 aa18.23■□□□□ 0.51
SDF4-207ENST00000494748 TOB2Q14106 344 aaPredicted RBP18.23■□□□□ 0.51
SDF4-207ENST00000494748 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
SDF4-207ENST00000494748 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
SDF4-207ENST00000494748 LTN1O94822 1766 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 SLC27A2O14975 620 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 NR1I2O75469 434 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
SDF4-207ENST00000494748 PODXL2Q9NZ53 605 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 TNNT1P13805 278 aa18.22■□□□□ 0.51
SDF4-207ENST00000494748 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
SDF4-207ENST00000494748 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
SDF4-207ENST00000494748 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
SDF4-207ENST00000494748 CDC25BP30305 580 aa18.21■□□□□ 0.51
SDF4-207ENST00000494748 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
SDF4-207ENST00000494748 RGPD2P0DJD1 1756 aa18.21■□□□□ 0.5
SDF4-207ENST00000494748 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 HSP90AB4PQ58FF6 505 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 TFIP11Q9UBB9 837 aaKnown RBP18.2■□□□□ 0.5
SDF4-207ENST00000494748 ERBB3P21860 1342 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 HOXC9P31274 260 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 AMPHP49418 695 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
SDF4-207ENST00000494748 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
SDF4-207ENST00000494748 IQCB1Q15051 598 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 EVI5LQ96CN4 794 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 SCAND2PQ9GZW5 306 aaPredicted RBP18.2■□□□□ 0.5
SDF4-207ENST00000494748 DNAJC25Q9H1X3 360 aa18.2■□□□□ 0.5
SDF4-207ENST00000494748 MORC2Q9Y6X9 1032 aaPredicted RBP18.2■□□□□ 0.5
SDF4-207ENST00000494748 USP27XA6NNY8 438 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 PDIA4P13667 645 aaKnown RBP18.19■□□□□ 0.5
SDF4-207ENST00000494748 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 FAM53CQ9NYF3 392 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 PAXBP1Q9Y5B6 917 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 TRIM5Q9C035 493 aa18.19■□□□□ 0.5
SDF4-207ENST00000494748 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
SDF4-207ENST00000494748 ARID5BQ14865 1188 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 NYAP1Q6ZVC0 841 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 KIF18AQ8NI77 898 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
SDF4-207ENST00000494748 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
SDF4-207ENST00000494748 ZNF165P49910 485 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 RESTQ13127 1097 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 SARM1Q6SZW1 724 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
SDF4-207ENST00000494748 CGNQ9P2M7 1197 aaKnown RBP18.18■□□□□ 0.5
SDF4-207ENST00000494748 CLIP2Q9UDT6 1046 aa18.18■□□□□ 0.5
SDF4-207ENST00000494748 MRC1P22897 1456 aa18.17■□□□□ 0.5
SDF4-207ENST00000494748 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
SDF4-207ENST00000494748 PDCP20941 246 aa18.17■□□□□ 0.5
SDF4-207ENST00000494748 LRRC8AQ8IWT6 810 aa18.17■□□□□ 0.5
SDF4-207ENST00000494748 COL15A1P39059 1388 aa18.17■□□□□ 0.5
SDF4-207ENST00000494748 KCNQ3O43525 872 aa18.16■□□□□ 0.5
SDF4-207ENST00000494748 GABPB1Q06547 395 aaPredicted RBP18.16■□□□□ 0.5
SDF4-207ENST00000494748 SASH1O94885 1247 aa18.16■□□□□ 0.5
SDF4-207ENST00000494748 ANXA1P04083 346 aa18.16■□□□□ 0.5
SDF4-207ENST00000494748 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
SDF4-207ENST00000494748 C11orf57Q6ZUT1 292 aaPredicted RBP18.16■□□□□ 0.5
SDF4-207ENST00000494748 TSGA10IPQ3SY00 556 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 DRC7Q8IY82 874 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 HOXB7P09629 217 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 MLECQ14165 292 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 CCDC112Q8NEF3 446 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
SDF4-207ENST00000494748 KMT5BQ4FZB7 885 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 CEP135Q66GS9 1140 aa18.15■□□□□ 0.5
SDF4-207ENST00000494748 TLR7Q9NYK1 1049 aaKnown RBP18.15■□□□□ 0.5
SDF4-207ENST00000494748 JAK2O60674 1132 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 ADD1P35611 737 aaKnown RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 EAF2Q96CJ1 260 aaPredicted RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 PSMA5P28066 241 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 CCZ1BP86790 482 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms