RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 WDR33Q9C0J8 1336 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 RALBP1Q15311 655 aa15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 THUMPD2Q9BTF0 503 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 ABT1Q9ULW3 272 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 RRP7AQ9Y3A4 280 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-212ENST00000494610 UBN2Q6ZU65 1347 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 RASSF10A6NK89 507 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 MYL6BP14649 208 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 ALDH1B1P30837 517 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 GPC2Q8N158 579 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 ZBTB3Q9H5J0 574 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 TSKSQ9UJT2 592 aa15.54■□□□□ 0.08
CSNK1E-212ENST00000494610 SCNN1DP51172 638 aa15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 CRY2Q49AN0 593 aa15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 SUSD4Q5VX71 490 aa15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 CYP4F22Q6NT55 531 aa15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
CSNK1E-212ENST00000494610 LAMB4A4D0S4 1761 aa15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 PAXIP1Q6ZW49 1069 aaPredicted RBP15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 ZNF428Q96B54 188 aa15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 PSMD1Q99460 953 aa15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
CSNK1E-212ENST00000494610 CCER2I3L3R5 266 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 CST9Q5W186 159 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 LARGE2Q8N3Y3 721 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 JDP2Q8WYK2 163 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 ABHD8Q96I13 439 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
CSNK1E-212ENST00000494610 MAP3K15Q6ZN16 1313 aa15.5■□□□□ 0.07
CSNK1E-212ENST00000494610 KDM3BQ7LBC6 1761 aa15.5■□□□□ 0.07
CSNK1E-212ENST00000494610 AOC2O75106 756 aa15.5■□□□□ 0.07
CSNK1E-212ENST00000494610 EIF6P56537 245 aaKnown RBP15.5■□□□□ 0.07
CSNK1E-212ENST00000494610 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
CSNK1E-212ENST00000494610 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 PPEF1O14829 653 aaPredicted RBP15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 AOC3Q16853 763 aa15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 CAPNS2Q96L46 248 aa15.49■□□□□ 0.07
CSNK1E-212ENST00000494610 TNRC18O15417 2968 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 NTSR2O95665 410 aa15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 ANXA1P04083 346 aa15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 DLK2Q6UY11 383 aa15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 MIER1Q8N108 512 aa15.48■□□□□ 0.07
CSNK1E-212ENST00000494610 SHTN1A0MZ66 631 aa15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 LMOD1P29536 600 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 KIF6Q6ZMV9 814 aa15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 ZNF34Q8IZ26 560 aa15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
CSNK1E-212ENST00000494610 TAF1P21675 1872 aa15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 RGL2O15211 777 aa15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 PPIP5K2O43314 1243 aa15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
CSNK1E-212ENST00000494610 TRPM7Q96QT4 1865 aa15.46■□□□□ 0.06
CSNK1E-212ENST00000494610 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
CSNK1E-212ENST00000494610 CCDC85CA6NKD9 419 aa15.45■□□□□ 0.06
CSNK1E-212ENST00000494610 RBM17Q96I25 401 aaKnown RBP15.45■□□□□ 0.06
CSNK1E-212ENST00000494610 GLIS2Q9BZE0 524 aaPredicted RBP15.45■□□□□ 0.06
CSNK1E-212ENST00000494610 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 GMPSP49915 693 aaPredicted RBP15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 CXCL9Q07325 125 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 NIM1KQ8IY84 436 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
CSNK1E-212ENST00000494610 ABCC4O15439 1325 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 HIRAP54198 1017 aaPredicted RBP15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 PDIA6Q15084 440 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 USP50Q70EL3 339 aaPredicted RBP15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 GPRC5DQ9NZD1 345 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 TLL2Q9Y6L7 1015 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 CASP8AP2Q9UKL3 1982 aa15.43■□□□□ 0.06
CSNK1E-212ENST00000494610 LAMB2P55268 1798 aa15.42■□□□□ 0.06
CSNK1E-212ENST00000494610 RAD17O75943 681 aa15.42■□□□□ 0.06
CSNK1E-212ENST00000494610 CELF2O95319 508 aaKnown RBP15.42■□□□□ 0.06
CSNK1E-212ENST00000494610 HCLS1P14317 486 aaPredicted RBP15.42■□□□□ 0.06
CSNK1E-212ENST00000494610 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
CSNK1E-212ENST00000494610 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
CSNK1E-212ENST00000494610 TRPM4Q8TD43 1214 aa15.41■□□□□ 0.06
CSNK1E-212ENST00000494610 ADARB2Q9NS39 739 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-212ENST00000494610 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
CSNK1E-212ENST00000494610 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-212ENST00000494610 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-212ENST00000494610 SAPCD2Q86UD0 394 aa15.4■□□□□ 0.06
CSNK1E-212ENST00000494610 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms