RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 CWC25Q9NXE8 425 aaPredicted RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
MINDY4-203ENST00000494187 GCKRQ14397 625 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 RAD21O60216 631 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 STARD3NLO95772 234 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
MINDY4-203ENST00000494187 AK2P54819 239 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 CPLX1O14810 134 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 XRCC6P12956 609 aaKnown RBP eCLIP11.11□□□□□ -0.63
MINDY4-203ENST00000494187 SF3A1Q15459 793 aaKnown RBP11.11□□□□□ -0.63
MINDY4-203ENST00000494187 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
MINDY4-203ENST00000494187 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 CEP170BQ9Y4F5 1589 aaPredicted RBP11.1□□□□□ -0.63
MINDY4-203ENST00000494187 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 RXRAP19793 462 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
MINDY4-203ENST00000494187 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 TAF5LO75529 589 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 ADCK5Q3MIX3 580 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
MINDY4-203ENST00000494187 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
MINDY4-203ENST00000494187 IGKV5-2P06315 115 aa11.09□□□□□ -0.63
MINDY4-203ENST00000494187 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
MINDY4-203ENST00000494187 CHAF1AQ13111 956 aaPredicted RBP11.09□□□□□ -0.63
MINDY4-203ENST00000494187 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
MINDY4-203ENST00000494187 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
MINDY4-203ENST00000494187 KIAA1210Q9ULL0 1709 aa11.08□□□□□ -0.63
MINDY4-203ENST00000494187 GJB2P29033 226 aa11.08□□□□□ -0.63
MINDY4-203ENST00000494187 ATP6V1AP38606 617 aa11.08□□□□□ -0.63
MINDY4-203ENST00000494187 RALYLQ86SE5 291 aaKnown RBP11.08□□□□□ -0.63
MINDY4-203ENST00000494187 BRF1Q92994 677 aa11.08□□□□□ -0.63
MINDY4-203ENST00000494187 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.63
MINDY4-203ENST00000494187 A0A0D9SFI3 127 aa11.08□□□□□ -0.64
MINDY4-203ENST00000494187 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
MINDY4-203ENST00000494187 CRB1P82279 1406 aa11.08□□□□□ -0.64
MINDY4-203ENST00000494187 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
MINDY4-203ENST00000494187 SPC24Q8NBT2 197 aa11.08□□□□□ -0.64
MINDY4-203ENST00000494187 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
MINDY4-203ENST00000494187 ANTXR1Q9H6X2 564 aa11.08□□□□□ -0.64
MINDY4-203ENST00000494187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
MINDY4-203ENST00000494187 UBAP1LF5GYI3 381 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
MINDY4-203ENST00000494187 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 EVI5LQ96CN4 794 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 KIF2CQ99661 725 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 CDC42BPGQ6DT37 1551 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 ALDH1L1O75891 902 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 SASH1O94885 1247 aa11.07□□□□□ -0.64
MINDY4-203ENST00000494187 SKOR2Q2VWA4 1001 aaPredicted RBP11.07□□□□□ -0.64
MINDY4-203ENST00000494187 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
MINDY4-203ENST00000494187 LIMCH1Q9UPQ0 1083 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
MINDY4-203ENST00000494187 SNX14Q9Y5W7 946 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 TRDNQ13061 729 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 DDB1Q16531 1140 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 NCOA5Q9HCD5 579 aaKnown RBP11.06□□□□□ -0.64
MINDY4-203ENST00000494187 MRE11P49959 708 aa11.06□□□□□ -0.64
MINDY4-203ENST00000494187 DNM1Q05193 864 aaKnown RBP11.06□□□□□ -0.64
MINDY4-203ENST00000494187 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 SGSM2O43147 1006 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 DZIP3Q86Y13 1208 aaKnown RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 IPO4Q8TEX9 1081 aaKnown RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 OTUD7BQ6GQQ9 843 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 ZNF589Q86UQ0 364 aaPredicted RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 NUP133Q8WUM0 1156 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 PSMA5P28066 241 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 CREB3L3Q68CJ9 461 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 MIGA1Q8NAN2 632 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 SNX21Q969T3 373 aa11.05□□□□□ -0.64
MINDY4-203ENST00000494187 DBNLQ9UJU6 430 aaKnown RBP11.05□□□□□ -0.64
MINDY4-203ENST00000494187 ADORA1P30542 326 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
MINDY4-203ENST00000494187 NIP7Q9Y221 180 aaKnown RBP eCLIP11.04□□□□□ -0.64
MINDY4-203ENST00000494187 ZBTB1Q9Y2K1 713 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 SPATA31D1Q6ZQQ2 1576 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 USP31Q70CQ4 1352 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 DLC1Q96QB1 1528 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms