RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DDX60Q8IY21 1712 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-212ENST00000494067 COL4A1P02462 1669 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 COPS6Q7L5N1 327 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
CTDSP1-212ENST00000494067 TAF1P21675 1872 aa17.48■□□□□ 0.39
CTDSP1-212ENST00000494067 HTRA3P83110 453 aa17.48■□□□□ 0.39
CTDSP1-212ENST00000494067 AIMP1Q12904 312 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-212ENST00000494067 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
CTDSP1-212ENST00000494067 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
CTDSP1-212ENST00000494067 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-212ENST00000494067 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
CTDSP1-212ENST00000494067 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
CTDSP1-212ENST00000494067 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■□ 22.8
CTDSP1-212ENST00000494067 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
CTDSP1-212ENST00000494067 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-212ENST00000494067 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-212ENST00000494067 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-212ENST00000494067 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
CTDSP1-212ENST00000494067 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
CTDSP1-212ENST00000494067 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
CTDSP1-212ENST00000494067 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 DNAJC5GQ8N7S2 189 aa17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-212ENST00000494067 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
CTDSP1-212ENST00000494067 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
CTDSP1-212ENST00000494067 GRIPAP1Q4V328 841 aa17.43■□□□□ 0.38
CTDSP1-212ENST00000494067 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
CTDSP1-212ENST00000494067 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
CTDSP1-212ENST00000494067 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 HOXB7P09629 217 aa17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 UTP14AQ9BVJ6 771 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-212ENST00000494067 ADAMTSL1Q8N6G6 1762 aa17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 HCLS1P14317 486 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
CTDSP1-212ENST00000494067 SCN4AP35499 1836 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 ABCC4O15439 1325 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
CTDSP1-212ENST00000494067 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 PSMD1Q99460 953 aa17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 ISCA1Q9BUE6 129 aa17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-212ENST00000494067 ATP5J2-PTCD1G3V325 749 aa17.38■□□□□ 0.37
CTDSP1-212ENST00000494067 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-212ENST00000494067 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-212ENST00000494067 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
CTDSP1-212ENST00000494067 FZD9O00144 591 aa17.37■□□□□ 0.37
CTDSP1-212ENST00000494067 GNAI1P63096 354 aa17.37■□□□□ 0.37
CTDSP1-212ENST00000494067 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
CTDSP1-212ENST00000494067 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-212ENST00000494067 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-212ENST00000494067 EIF6P56537 245 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-212ENST00000494067 CHADLQ6NUI6 762 aa17.36■□□□□ 0.37
CTDSP1-212ENST00000494067 CHMP4AQ9BY43 222 aa17.36■□□□□ 0.37
CTDSP1-212ENST00000494067 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
CTDSP1-212ENST00000494067 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
CTDSP1-212ENST00000494067 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
CTDSP1-212ENST00000494067 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-212ENST00000494067 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
CTDSP1-212ENST00000494067 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
CTDSP1-212ENST00000494067 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
CTDSP1-212ENST00000494067 ATP6V0A2Q9Y487 856 aa17.34■□□□□ 0.37
CTDSP1-212ENST00000494067 BBOX1O75936 387 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 LDHDQ86WU2 507 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 GPC2Q8N158 579 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 TAF1DQ9H5J8 278 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
CTDSP1-212ENST00000494067 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 AOC3Q16853 763 aa17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 CCDC27Q2M243 656 aa17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
CTDSP1-212ENST00000494067 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms