RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 CHD4Q14839 1912 aa12.9□□□□□ -0.34
RFC2-211ENST00000494019 RIC1Q4ADV7 1423 aa12.9□□□□□ -0.34
RFC2-211ENST00000494019 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
RFC2-211ENST00000494019 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
RFC2-211ENST00000494019 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
RFC2-211ENST00000494019 METTL22Q9BUU2 404 aaPredicted RBP12.9□□□□□ -0.34
RFC2-211ENST00000494019 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
RFC2-211ENST00000494019 DPEP1P16444 411 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 TGFB2P61812 414 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
RFC2-211ENST00000494019 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
RFC2-211ENST00000494019 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
RFC2-211ENST00000494019 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 F6X3S4 739 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 CHRNA5P30532 468 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 PDE6BP35913 854 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
RFC2-211ENST00000494019 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 TRMT112Q9UI30 125 aaKnown RBP12.88□□□□□ -0.35
RFC2-211ENST00000494019 PTPRCP08575 1304 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
RFC2-211ENST00000494019 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
RFC2-211ENST00000494019 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
RFC2-211ENST00000494019 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
RFC2-211ENST00000494019 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
RFC2-211ENST00000494019 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
RFC2-211ENST00000494019 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
RFC2-211ENST00000494019 H0YIN7 160 aa12.86□□□□□ -0.35
RFC2-211ENST00000494019 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
RFC2-211ENST00000494019 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
RFC2-211ENST00000494019 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
RFC2-211ENST00000494019 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
RFC2-211ENST00000494019 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
RFC2-211ENST00000494019 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 GPR162Q16538 588 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
RFC2-211ENST00000494019 BCAR3O75815 825 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 SRGNP10124 158 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■□ 20
RFC2-211ENST00000494019 KCNA3P22001 575 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
RFC2-211ENST00000494019 ZBTB38Q8NAP3 1195 aaPredicted RBP12.84□□□□□ -0.35
RFC2-211ENST00000494019 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFC2-211ENST00000494019 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
RFC2-211ENST00000494019 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 SBF1O95248 1867 aa12.84□□□□□ -0.35
RFC2-211ENST00000494019 LRRC37AA6NMS7 1700 aa12.83□□□□□ -0.36
RFC2-211ENST00000494019 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
RFC2-211ENST00000494019 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
RFC2-211ENST00000494019 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
RFC2-211ENST00000494019 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
RFC2-211ENST00000494019 RPGRQ92834 1020 aaKnown RBP12.83□□□□□ -0.36
RFC2-211ENST00000494019 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
RFC2-211ENST00000494019 MASTLQ96GX5 879 aa12.83□□□□□ -0.36
RFC2-211ENST00000494019 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
RFC2-211ENST00000494019 KLRG2A4D1S0 409 aaPredicted RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 NPR1P16066 1061 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 GCKRQ14397 625 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 SRCIN1Q9C0H9 1055 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 COL4A1P02462 1669 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 CDHR2Q9BYE9 1310 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
RFC2-211ENST00000494019 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
RFC2-211ENST00000494019 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
RFC2-211ENST00000494019 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
RFC2-211ENST00000494019 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
RFC2-211ENST00000494019 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
RFC2-211ENST00000494019 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
RFC2-211ENST00000494019 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
RFC2-211ENST00000494019 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
RFC2-211ENST00000494019 GRM8O00222 908 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
RFC2-211ENST00000494019 PDE8AO60658 829 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 TRIM27P14373 513 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
RFC2-211ENST00000494019 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
RFC2-211ENST00000494019 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 ABCC4O15439 1325 aa12.79□□□□□ -0.36
RFC2-211ENST00000494019 H7C1W4 665 aa12.78□□□□□ -0.36
RFC2-211ENST00000494019 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
RFC2-211ENST00000494019 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms