RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
VCP-207ENST00000493886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
VCP-207ENST00000493886 SGSM2O43147 1006 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 PKP1Q13835 747 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 A0A087WZG4 1122 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 A1BGP04217 495 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
VCP-207ENST00000493886 COL15A1P39059 1388 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 TNS2Q63HR2 1409 aa16.68■□□□□ 0.26
VCP-207ENST00000493886 NEK4P51957 841 aa16.67■□□□□ 0.26
VCP-207ENST00000493886 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
VCP-207ENST00000493886 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
VCP-207ENST00000493886 HOMEZQ8IX15 550 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 IL17RAQ96F46 866 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 PRDM4Q9UKN5 801 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 TOGARAM1Q9Y4F4 1720 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 CCDC8Q9H0W5 538 aaPredicted RBP16.66■□□□□ 0.26
VCP-207ENST00000493886 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 CASP7P55210 303 aa16.66■□□□□ 0.26
VCP-207ENST00000493886 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 HSPA4P34932 840 aa16.65■□□□□ 0.26
VCP-207ENST00000493886 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
VCP-207ENST00000493886 RAD50Q92878 1312 aa16.65■□□□□ 0.26
VCP-207ENST00000493886 FOXD4L5Q5VV16 416 aaPredicted RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 FOXD4L4Q8WXT5 416 aaPredicted RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 DDX49Q9Y6V7 483 aaKnown RBP16.65■□□□□ 0.26
VCP-207ENST00000493886 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
VCP-207ENST00000493886 EVI5LQ96CN4 794 aa16.64■□□□□ 0.25
VCP-207ENST00000493886 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
VCP-207ENST00000493886 MCM2P49736 904 aa16.64■□□□□ 0.25
VCP-207ENST00000493886 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
VCP-207ENST00000493886 ZGPATQ8N5A5 531 aaKnown RBP16.64■□□□□ 0.25
VCP-207ENST00000493886 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
VCP-207ENST00000493886 TLR7Q9NYK1 1049 aaKnown RBP16.64■□□□□ 0.25
VCP-207ENST00000493886 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
VCP-207ENST00000493886 BAG4O95429 457 aaKnown RBP16.63■□□□□ 0.25
VCP-207ENST00000493886 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
VCP-207ENST00000493886 H7C1W4 665 aa16.63■□□□□ 0.25
VCP-207ENST00000493886 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
VCP-207ENST00000493886 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
VCP-207ENST00000493886 COL14A1Q05707 1796 aaKnown RBP16.63■□□□□ 0.25
VCP-207ENST00000493886 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
VCP-207ENST00000493886 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
VCP-207ENST00000493886 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 NUCB2P80303 420 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 PIGBQ92521 554 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
VCP-207ENST00000493886 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
VCP-207ENST00000493886 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
VCP-207ENST00000493886 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
VCP-207ENST00000493886 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
VCP-207ENST00000493886 UPF3BQ9BZI7 483 aaKnown RBP16.61■□□□□ 0.25
VCP-207ENST00000493886 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
VCP-207ENST00000493886 FOXO4P98177 505 aa16.6■□□□□ 0.25
VCP-207ENST00000493886 TRIM44Q96DX7 344 aaPredicted RBP16.6■□□□□ 0.25
VCP-207ENST00000493886 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
VCP-207ENST00000493886 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
VCP-207ENST00000493886 TFCP2Q12800 502 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
VCP-207ENST00000493886 CLEC17AQ6ZS10 378 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
VCP-207ENST00000493886 CYP2E1P05181 493 aaPredicted RBP16.59■□□□□ 0.25
VCP-207ENST00000493886 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
VCP-207ENST00000493886 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
VCP-207ENST00000493886 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 TJP1Q07157 1748 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 HIP1O00291 1037 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 DNAJC10Q8IXB1 793 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
VCP-207ENST00000493886 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.24
VCP-207ENST00000493886 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.24
VCP-207ENST00000493886 CUL4AQ13619 759 aa16.58■□□□□ 0.24
VCP-207ENST00000493886 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
VCP-207ENST00000493886 ITGB4P16144 1822 aa16.58■□□□□ 0.24
VCP-207ENST00000493886 ESPNB1AK53 854 aa16.57■□□□□ 0.24
VCP-207ENST00000493886 PTMSP20962 102 aa16.57■□□□□ 0.24
VCP-207ENST00000493886 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
VCP-207ENST00000493886 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
VCP-207ENST00000493886 CLCN1P35523 988 aa16.57■□□□□ 0.24
VCP-207ENST00000493886 PTH1RQ03431 593 aa16.57■□□□□ 0.24
VCP-207ENST00000493886 FSD1Q9BTV5 496 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
VCP-207ENST00000493886 FAM227BQ96M60 508 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 STARD3NLO95772 234 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 ATP5JP18859 108 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
VCP-207ENST00000493886 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
VCP-207ENST00000493886 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms