RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TSR2Q969E8 191 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 CTAGE1Q96RT6 745 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 IFIT1P09914 478 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 SARNPP82979 210 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 CACNA2D3Q8IZS8 1091 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 TRIM47Q96LD4 638 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 GLRX3O76003 335 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 CA8P35219 290 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 DDX54Q8TDD1 881 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 FAM114A2Q9NRY5 505 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 GUCY1B3Q02153 619 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 NAA25Q14CX7 972 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 TOM1L2Q6ZVM7 507 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 CCT6BQ92526 530 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 SPAG5Q96R06 1193 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 FAM169AQ9Y6X4 670 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 MAP3K12Q12852 859 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 CPLX4Q7Z7G2 160 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 NBPF11Q86T75 865 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 WDR63Q8IWG1 891 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 MMRN2Q9H8L6 949 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 N4BP3O15049 544 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 PPP2R1AP30153 589 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-221ENST00000493795 ERCC6LQ2NKX8 1250 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 CDCA7LQ96GN5 454 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.97□□□□□ -0.97
BRCA1-221ENST00000493795 ZNF213O14771 459 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 ATP11AP98196 1134 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 BICDL1Q6ZP65 573 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 ZNF526Q8TF50 670 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-221ENST00000493795 KIF1BPQ96EK5 621 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 PFDN4Q9NQP4 134 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
BRCA1-221ENST00000493795 FHOD3Q2V2M9 1422 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 BIN1O00499 593 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 STMN1P16949 149 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 CAPN2P17655 700 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 MX1P20591 662 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 A0A1B0GUA9 196 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 BTBD11A6QL63 1104 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 CRCPO75575 148 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 SEPT14Q6ZU15 432 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 ARFGAP2Q8N6H7 521 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 ZNF428Q96B54 188 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 EPSTI1Q96J88 318 aa8.96□□□□□ -0.97
BRCA1-221ENST00000493795 IFIT3O14879 490 aaKnown RBP8.96□□□□□ -0.98
BRCA1-221ENST00000493795 PHACTR2O75167 634 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.98
BRCA1-221ENST00000493795 ERMNQ8TAM6 284 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 TUBB4AP04350 444 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 UBA7P41226 1012 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 TTF1Q15361 905 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-221ENST00000493795 JAKMIP2Q96AA8 810 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 TUBB4BP68371 445 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC102BQ68D86 513 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 IFT74Q96LB3 600 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 RNF216Q9NWF9 866 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-221ENST00000493795 MRVI1Q9Y6F6 885 aa8.96□□□□□ -0.98
BRCA1-221ENST00000493795 MCM6Q14566 821 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 DNAJC21Q5F1R6 531 aaKnown RBP8.95□□□□□ -0.98
BRCA1-221ENST00000493795 CEP85LQ5SZL2 805 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 SULT6B1Q6IMI4 303 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC50Q8IVM0 306 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 GOLGA1Q92805 767 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 NUF2Q9BZD4 464 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 EEF2P13639 858 aaKnown RBP8.95□□□□□ -0.98
BRCA1-221ENST00000493795 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 RAB3IPQ96QF0 476 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-221ENST00000493795 MTRF1LQ9UGC7 380 aaKnown RBP8.95□□□□□ -0.98
BRCA1-221ENST00000493795 LIMCH1Q9UPQ0 1083 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 SLC5A1P13866 664 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 GBP1P32455 592 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 NEDD9Q14511 834 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 KCNK9Q9NPC2 374 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 USH1CQ9Y6N9 552 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 CTAGE9A4FU28 777 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 GAS8O95995 478 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 GJC1P36383 396 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 MAP7Q14244 749 aa8.95□□□□□ -0.98
BRCA1-221ENST00000493795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.95□□□□□ -0.98
BRCA1-221ENST00000493795 STARD3NLO95772 234 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 RRAGBQ5VZM2 374 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC82Q8N4S0 544 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 MSANTD4Q8NCY6 345 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 ATP5DP30049 168 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 IMPG2Q9BZV3 1241 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 ZNF165P49910 485 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 PLCB3Q01970 1234 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 SPAG1Q07617 926 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms