RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PSMD2Q13200 908 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 MORC1Q86VD1 984 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 PARP4Q9UKK3 1724 aaKnown RBP8.08□□□□□ -1.12
VPS13B-205ENST00000493587 STRCQ7RTU9 1775 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 SLIT3O75094 1523 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 NFATC2IPQ8NCF5 419 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 ERO1AQ96HE7 468 aa8.08□□□□□ -1.12
VPS13B-205ENST00000493587 ATAD2Q6PL18 1390 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 SLU7O95391 586 aaKnown RBP8.07□□□□□ -1.12
VPS13B-205ENST00000493587 PNMA6AP0CW24 399 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-205ENST00000493587 PTPN14Q15678 1187 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 JAKMIP3Q5VZ66 844 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 CEP89Q96ST8 783 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 TNRQ92752 1358 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 KIF2AO00139 706 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-205ENST00000493587 POLD1P28340 1107 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 NF2P35240 595 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 GSCP56915 257 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-205ENST00000493587 FMNL3Q8IVF7 1028 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 SUDS3Q9H7L9 328 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-205ENST00000493587 PKD1L3Q7Z443 1732 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 KIF1AQ12756 1690 aa8.07□□□□□ -1.12
VPS13B-205ENST00000493587 GNL2Q13823 731 aaKnown RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 DHX8Q14562 1220 aaKnown RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 WNK3Q9BYP7 1800 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 KDM4AO75164 1064 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 ACTN2P35609 894 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 ERCC6LQ2NKX8 1250 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 ARHGAP29Q52LW3 1261 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 CWC27Q6UX04 472 aaKnown RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 BCL2L13Q9BXK5 485 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 KLHL33A6NCF5 533 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 CCT2P78371 535 aaKnown RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 LRMPQ12912 555 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 SWT1Q5T5J6 900 aaKnown RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 JPH2Q9BR39 696 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-205ENST00000493587 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
VPS13B-205ENST00000493587 CTAGE5O15320 804 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 PDE3AQ14432 1141 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 SUGP1Q8IWZ8 645 aaKnown RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 TRMT1Q9NXH9 659 aaKnown RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 BIN2Q9UBW5 565 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 SETD1BQ9UPS6 1966 aaKnown RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 PAX7P23759 505 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 PDE6BP35913 854 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 CLCN6P51797 869 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 NAP1L1P55209 391 aaKnown RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 IRX1P78414 480 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-205ENST00000493587 UBXN4Q92575 508 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 VEZTQ9HBM0 779 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 NCOA3Q9Y6Q9 1424 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 TMEM132AQ24JP5 1023 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 AK9Q5TCS8 1911 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 PIK3R4Q99570 1358 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 SCN11AQ9UI33 1791 aa8.05□□□□□ -1.12
VPS13B-205ENST00000493587 UBR2Q8IWV8 1755 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 NUTM2GQ5VZR2 741 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 N4BP2L2Q92802 583 aaPredicted RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 TRIM5Q9C035 493 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 ATG3Q9NT62 314 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 FRMD3A2A2Y4 597 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 CASTP20810 708 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 GCKP35557 465 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 PEX19P40855 299 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 ARMC3Q5W041 872 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 FAM210AQ96ND0 272 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 TRIM6Q9C030 488 aaPredicted RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 SPATS2LQ9NUQ6 558 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 CCP110O43303 1012 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 LTKP29376 864 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 SMC1AQ14683 1233 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 CLEC17AQ6ZS10 378 aa8.04□□□□□ -1.12
VPS13B-205ENST00000493587 NOL8Q76FK4 1167 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 THOC1Q96FV9 657 aaKnown RBP8.04□□□□□ -1.12
VPS13B-205ENST00000493587 ERLIN2O94905 339 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 LIG3P49916 1009 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 SF3A1Q15459 793 aaKnown RBP8.03□□□□□ -1.12
VPS13B-205ENST00000493587 TBC1D22AQ8WUA7 517 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 ERCC4Q92889 916 aaPredicted RBP8.03□□□□□ -1.12
VPS13B-205ENST00000493587 LNPKQ9C0E8 428 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 RGS12O14924 1447 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 CEBPAP49715 358 aaPredicted RBP8.03□□□□□ -1.12
VPS13B-205ENST00000493587 MFSD4BQ5TF39 518 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms