RNA–Protein interactions for RNA: ENST00000493394.1

RGPD5-211, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 960 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-211ENST00000493394 THUMPD2Q9BTF0 503 aaKnown RBP9.56□□□□□ -0.88
RGPD5-211ENST00000493394 CHMP4AQ9BY43 222 aa9.56□□□□□ -0.88
RGPD5-211ENST00000493394 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
RGPD5-211ENST00000493394 ANKRD26Q9UPS8 1709 aa9.56□□□□□ -0.88
RGPD5-211ENST00000493394 NPHP1O15259 732 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 GNAI1P63096 354 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
RGPD5-211ENST00000493394 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 FAM198AQ9UFP1 575 aa9.55□□□□□ -0.88
RGPD5-211ENST00000493394 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
RGPD5-211ENST00000493394 GNPATO15228 680 aa9.54□□□□□ -0.88
RGPD5-211ENST00000493394 SNRPA1P09661 255 aaKnown RBP9.54□□□□□ -0.88
RGPD5-211ENST00000493394 EIF2S2P20042 333 aaKnown RBP9.54□□□□□ -0.88
RGPD5-211ENST00000493394 CANXP27824 592 aaKnown RBP9.54□□□□□ -0.88
RGPD5-211ENST00000493394 RFC4P35249 363 aa9.54□□□□□ -0.88
RGPD5-211ENST00000493394 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
RGPD5-211ENST00000493394 SEPT9Q9UHD8 586 aaPredicted RBP9.54□□□□□ -0.88
RGPD5-211ENST00000493394 BCL9O00512 1426 aa9.54□□□□□ -0.88
RGPD5-211ENST00000493394 FAM208AQ9UK61 1670 aaKnown RBP9.54□□□□□ -0.88
RGPD5-211ENST00000493394 ZPR1O75312 459 aa9.53□□□□□ -0.88
RGPD5-211ENST00000493394 NGEFQ8N5V2 710 aa9.53□□□□□ -0.88
RGPD5-211ENST00000493394 THSD7AQ9UPZ6 1657 aa9.52□□□□□ -0.89
RGPD5-211ENST00000493394 C3orf80F5H4A9 247 aa9.52□□□□□ -0.89
RGPD5-211ENST00000493394 POLD1P28340 1107 aa9.52□□□□□ -0.89
RGPD5-211ENST00000493394 MYH16Q9H6N6 1097 aa9.52□□□□□ -0.89
RGPD5-211ENST00000493394 A0A087WZG4 1122 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 NRG2O14511 850 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 MLLT3P42568 568 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 PRSS12P56730 875 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 HNRNPUQ00839 825 aaKnown RBP eCLIP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 DNAJC10Q8IXB1 793 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 LRRC4BQ9NT99 713 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 BABAM1Q9NWV8 329 aa9.51□□□□□ -0.89
RGPD5-211ENST00000493394 TSR3Q9UJK0 312 aaKnown RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-211ENST00000493394 NCAPD2Q15021 1401 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 ZBTB7AO95365 584 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
RGPD5-211ENST00000493394 WDR63Q8IWG1 891 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 SPON1Q9HCB6 807 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
RGPD5-211ENST00000493394 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 IFT57Q9NWB7 429 aa9.5□□□□□ -0.89
RGPD5-211ENST00000493394 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
RGPD5-211ENST00000493394 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 KAT6BQ8WYB5 2073 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
RGPD5-211ENST00000493394 KCNQ3O43525 872 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 MYL6BP14649 208 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 STK31Q9BXU1 1019 aa9.49□□□□□ -0.89
RGPD5-211ENST00000493394 RPS6KA4O75676 772 aa9.48□□□□□ -0.89
RGPD5-211ENST00000493394 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
RGPD5-211ENST00000493394 ITPK1Q13572 414 aa9.48□□□□□ -0.89
RGPD5-211ENST00000493394 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
RGPD5-211ENST00000493394 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
RGPD5-211ENST00000493394 KIF6Q6ZMV9 814 aa9.48□□□□□ -0.89
RGPD5-211ENST00000493394 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
RGPD5-211ENST00000493394 YTHDC1Q96MU7 727 aaKnown RBP9.48□□□□□ -0.89
RGPD5-211ENST00000493394 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
RGPD5-211ENST00000493394 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 CHL1O00533 1208 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 A1BGP04217 495 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 SSFA2P28290 1259 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
RGPD5-211ENST00000493394 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
RGPD5-211ENST00000493394 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 NLGN1Q8N2Q7 840 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
RGPD5-211ENST00000493394 USP16Q9Y5T5 823 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
RGPD5-211ENST00000493394 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 CYP19A1P11511 503 aaPredicted RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 ZNF827Q17R98 1081 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 CCDC30Q5VVM6 783 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 COL23A1Q86Y22 540 aaPredicted RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 MTFR1LQ9H019 292 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 MBIPQ9NS73 344 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
RGPD5-211ENST00000493394 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.9
RGPD5-211ENST00000493394 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms