RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FAM177BA6PVY3 158 aa14.59□□□□□ -0.07
SNRNP200-207ENST00000493271 PPP2R1AP30153 589 aa14.59□□□□□ -0.07
SNRNP200-207ENST00000493271 VPS33BQ9H267 617 aa14.59□□□□□ -0.07
SNRNP200-207ENST00000493271 ERBB4Q15303 1308 aa14.59□□□□□ -0.07
SNRNP200-207ENST00000493271 ECE1P42892 770 aa14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 DCTN1Q14203 1278 aa14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 OLFM4Q6UX06 510 aa14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 TMX4Q9H1E5 349 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
SNRNP200-207ENST00000493271 USP50Q70EL3 339 aaPredicted RBP14.57□□□□□ -0.08
SNRNP200-207ENST00000493271 RBM17Q96I25 401 aaKnown RBP14.57□□□□□ -0.08
SNRNP200-207ENST00000493271 DDX21Q9NR30 783 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNRNP200-207ENST00000493271 ABT1Q9ULW3 272 aaKnown RBP14.57□□□□□ -0.08
SNRNP200-207ENST00000493271 ABCC12Q96J65 1359 aa14.57□□□□□ -0.08
SNRNP200-207ENST00000493271 LBX1P52954 281 aa14.56□□□□□ -0.08
SNRNP200-207ENST00000493271 LARGE2Q8N3Y3 721 aa14.56□□□□□ -0.08
SNRNP200-207ENST00000493271 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
SNRNP200-207ENST00000493271 GJA3Q9Y6H8 435 aa14.56□□□□□ -0.08
SNRNP200-207ENST00000493271 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 HSPA8P11142 646 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 PARP10Q53GL7 1025 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 PPP1R42Q7Z4L9 355 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 NUTM1Q86Y26 1132 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 BEGAINQ9BUH8 593 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 NUP98P52948 1817 aa14.55□□□□□ -0.08
SNRNP200-207ENST00000493271 PPEF1O14829 653 aaPredicted RBP14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 SCNN1DP51172 638 aa14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 GIGYF2Q6Y7W6 1299 aaKnown RBP14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 SUPT20HQ8NEM7 779 aa14.54□□□□□ -0.08
SNRNP200-207ENST00000493271 UBN2Q6ZU65 1347 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 ZNF34Q8IZ26 560 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 NLRP3Q96P20 1036 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
SNRNP200-207ENST00000493271 NTSR2O95665 410 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 GPTP24298 496 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 TTLL7Q6ZT98 887 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 CAPNS2Q96L46 248 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 ADARB2Q9NS39 739 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 COL4A5P29400 1685 aa14.52□□□□□ -0.09
SNRNP200-207ENST00000493271 PPIP5K2O43314 1243 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 CA12O43570 354 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 MYL6BP14649 208 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 MAP2K2P36507 400 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 EPS15P42566 896 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 SLC10A5Q5PT55 438 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 ABHD8Q96I13 439 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 HHIPL1Q96JK4 782 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 GPRC5DQ9NZD1 345 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 ATP6V0A2Q9Y487 856 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 TLL2Q9Y6L7 1015 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 LTBP1Q14766 1721 aa14.51□□□□□ -0.09
SNRNP200-207ENST00000493271 MAPK8IP3Q9UPT6 1336 aa14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 GPR101Q96P66 508 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 RTFDC1Q9BY42 306 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 ZNRF3Q9ULT6 936 aa14.5□□□□□ -0.09
SNRNP200-207ENST00000493271 BBOX1O75936 387 aa14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 ZC3H15Q8WU90 426 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 PLEKHF1Q96S99 279 aa14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
SNRNP200-207ENST00000493271 TRPM7Q96QT4 1865 aa14.48□□□□□ -0.09
SNRNP200-207ENST00000493271 CST9Q5W186 159 aa14.48□□□□□ -0.09
SNRNP200-207ENST00000493271 TMC4Q7Z404 712 aa14.48□□□□□ -0.09
SNRNP200-207ENST00000493271 PGAP2Q9UHJ9 254 aa14.48□□□□□ -0.09
SNRNP200-207ENST00000493271 CXCL9Q07325 125 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 TNIP1Q15025 636 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 AOC3Q16853 763 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 CYP4F22Q6NT55 531 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 DPP8Q6V1X1 898 aaPredicted RBP14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 SP8Q8IXZ3 490 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 TSPYL4Q9UJ04 414 aa14.47□□□□□ -0.09
SNRNP200-207ENST00000493271 ABCC4O15439 1325 aa14.46□□□□□ -0.09
SNRNP200-207ENST00000493271 KIAA2012Q0VF49 1180 aa14.46□□□□□ -0.09
SNRNP200-207ENST00000493271 CIAPIN1Q6FI81 312 aa14.46□□□□□ -0.09
SNRNP200-207ENST00000493271 SAPCD2Q86UD0 394 aa14.46□□□□□ -0.09
SNRNP200-207ENST00000493271 TRAF5O00463 557 aa14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 TCERG1O14776 1098 aaKnown RBP14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 BRPF1P55201 1214 aaPredicted RBP14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 LMOD3Q0VAK6 560 aa14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 C3orf67Q6ZVT6 689 aa14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 LRP10Q7Z4F1 713 aa14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 MPNDQ8N594 471 aa14.45□□□□□ -0.1
SNRNP200-207ENST00000493271 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 RGS19P49795 217 aa14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 GMPSP49915 693 aaPredicted RBP14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 GRM1Q13255 1194 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms