RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 PDE6BP35913 854 aa21.32■■□□□ 1
CCDC13-208ENST00000492806 MYD88Q99836 296 aa21.32■■□□□ 1
CCDC13-208ENST00000492806 UTRNP46939 3433 aa21.32■■□□□ 1
CCDC13-208ENST00000492806 PXDNLA1KZ92 1463 aa21.32■■□□□ 1
CCDC13-208ENST00000492806 N4BP2Q86UW6 1770 aaPredicted RBP21.31■■□□□ 1
CCDC13-208ENST00000492806 FAM177BA6PVY3 158 aa21.31■■□□□ 1
CCDC13-208ENST00000492806 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
CCDC13-208ENST00000492806 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
CCDC13-208ENST00000492806 GRIN3BO60391 1043 aa21.3■■□□□ 1
CCDC13-208ENST00000492806 BRCA1P38398 1863 aaKnown RBP21.3■■□□□ 1
CCDC13-208ENST00000492806 KIF16BQ96L93 1317 aa21.29■■□□□ 1
CCDC13-208ENST00000492806 LINS1Q8NG48 757 aa21.29■■□□□ 1
CCDC13-208ENST00000492806 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
CCDC13-208ENST00000492806 CWC25Q9NXE8 425 aaPredicted RBP21.29■■□□□ 1
CCDC13-208ENST00000492806 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
CCDC13-208ENST00000492806 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
CCDC13-208ENST00000492806 GOLGB1Q14789 3259 aaKnown RBP21.28■■□□□ 1
CCDC13-208ENST00000492806 CHD4Q14839 1912 aa21.28■■□□□ 1
CCDC13-208ENST00000492806 KLRG2A4D1S0 409 aaPredicted RBP21.28■■□□□ 1
CCDC13-208ENST00000492806 H0YIN7 160 aa21.28■■□□□ 1
CCDC13-208ENST00000492806 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
CCDC13-208ENST00000492806 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
CCDC13-208ENST00000492806 IGKV5-2P06315 115 aa21.27■■□□□ 1
CCDC13-208ENST00000492806 DPEP1P16444 411 aa21.27■■□□□ 1
CCDC13-208ENST00000492806 ERFEQ4G0M1 354 aa21.27■■□□□ 1
CCDC13-208ENST00000492806 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
CCDC13-208ENST00000492806 ABCC12Q96J65 1359 aa21.26■□□□□ 0.99
CCDC13-208ENST00000492806 A0A0G2JLW4 131 aa21.26■□□□□ 0.99
CCDC13-208ENST00000492806 NEURL1BA8MQ27 555 aa21.26■□□□□ 0.99
CCDC13-208ENST00000492806 PCCAP05165 728 aaPredicted RBP21.26■□□□□ 0.99
CCDC13-208ENST00000492806 C2CD5Q86YS7 1000 aa21.26■□□□□ 0.99
CCDC13-208ENST00000492806 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
CCDC13-208ENST00000492806 ZBTB38Q8NAP3 1195 aaPredicted RBP21.26■□□□□ 0.99
CCDC13-208ENST00000492806 LAMB2P55268 1798 aa21.25■□□□□ 0.99
CCDC13-208ENST00000492806 F6X3S4 739 aa21.25■□□□□ 0.99
CCDC13-208ENST00000492806 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
CCDC13-208ENST00000492806 ARHGAP45Q92619 1136 aa21.25■□□□□ 0.99
CCDC13-208ENST00000492806 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
CCDC13-208ENST00000492806 API5Q9BZZ5 524 aaKnown RBP21.25■□□□□ 0.99
CCDC13-208ENST00000492806 PIM2Q9P1W9 311 aa21.25■□□□□ 0.99
CCDC13-208ENST00000492806 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
CCDC13-208ENST00000492806 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
CCDC13-208ENST00000492806 KCNA3P22001 575 aa21.24■□□□□ 0.99
CCDC13-208ENST00000492806 BEND3Q5T5X7 828 aa21.24■□□□□ 0.99
CCDC13-208ENST00000492806 NLRP3Q96P20 1036 aa21.24■□□□□ 0.99
CCDC13-208ENST00000492806 ARFGEF1Q9Y6D6 1849 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 SRGNP10124 158 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 CHRNA5P30532 468 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 STYK1Q6J9G0 422 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 FAM89AQ96GI7 184 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 MASTLQ96GX5 879 aa21.23■□□□□ 0.99
CCDC13-208ENST00000492806 NOB1Q9ULX3 412 aaKnown RBP21.23■□□□□ 0.99
CCDC13-208ENST00000492806 TNRC6CQ9HCJ0 1690 aaKnown RBP21.23■□□□□ 0.99
CCDC13-208ENST00000492806 DDX60Q8IY21 1712 aaKnown RBP21.23■□□□□ 0.99
CCDC13-208ENST00000492806 NPR1P16066 1061 aa21.22■□□□□ 0.99
CCDC13-208ENST00000492806 GCKRQ14397 625 aa21.22■□□□□ 0.99
CCDC13-208ENST00000492806 CWF19L2Q2TBE0 894 aaKnown RBP21.22■□□□□ 0.99
CCDC13-208ENST00000492806 CRY2Q49AN0 593 aa21.22■□□□□ 0.99
CCDC13-208ENST00000492806 SRCIN1Q9C0H9 1055 aa21.22■□□□□ 0.99
CCDC13-208ENST00000492806 CDHR2Q9BYE9 1310 aa21.22■□□□□ 0.99
CCDC13-208ENST00000492806 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCDC13-208ENST00000492806 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
CCDC13-208ENST00000492806 CNKSR1Q969H4 720 aa21.21■□□□□ 0.99
CCDC13-208ENST00000492806 MYH3P11055 1940 aa21.2■□□□□ 0.98
CCDC13-208ENST00000492806 H7C1W4 665 aa21.2■□□□□ 0.98
CCDC13-208ENST00000492806 IRS4O14654 1257 aaPredicted RBP21.2■□□□□ 0.98
CCDC13-208ENST00000492806 BCAR3O75815 825 aa21.2■□□□□ 0.98
CCDC13-208ENST00000492806 DALRD3Q5D0E6 543 aaKnown RBP21.2■□□□□ 0.98
CCDC13-208ENST00000492806 TTLL6Q8N841 843 aa21.2■□□□□ 0.98
CCDC13-208ENST00000492806 HCLS1P14317 486 aaPredicted RBP21.19■□□□□ 0.98
CCDC13-208ENST00000492806 ALDH1B1P30837 517 aa21.19■□□□□ 0.98
CCDC13-208ENST00000492806 HOXA10P31260 410 aaPredicted RBP21.19■□□□□ 0.98
CCDC13-208ENST00000492806 SYNE4Q8N205 404 aa21.19■□□□□ 0.98
CCDC13-208ENST00000492806 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC13-208ENST00000492806 CCT4P50991 539 aaKnown RBP21.18■□□□□ 0.98
CCDC13-208ENST00000492806 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
CCDC13-208ENST00000492806 RPGRQ92834 1020 aaKnown RBP21.18■□□□□ 0.98
CCDC13-208ENST00000492806 PDE8AO60658 829 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 SF3B3Q15393 1217 aaKnown RBP21.17■□□□□ 0.98
CCDC13-208ENST00000492806 UBE3BQ7Z3V4 1068 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 RCAN3Q9UKA8 241 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 BCS1LQ9Y276 419 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 CACNA1SQ13698 1873 aa21.17■□□□□ 0.98
CCDC13-208ENST00000492806 GRM8O00222 908 aa21.16■□□□□ 0.98
CCDC13-208ENST00000492806 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
CCDC13-208ENST00000492806 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
CCDC13-208ENST00000492806 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
CCDC13-208ENST00000492806 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
CCDC13-208ENST00000492806 PLA2G12BQ9BX93 195 aa21.16■□□□□ 0.98
CCDC13-208ENST00000492806 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
CCDC13-208ENST00000492806 CASP7P55210 303 aa21.15■□□□□ 0.98
CCDC13-208ENST00000492806 ZNF784Q8NCA9 323 aaPredicted RBP21.15■□□□□ 0.98
CCDC13-208ENST00000492806 SLX4Q8IY92 1834 aa21.15■□□□□ 0.98
CCDC13-208ENST00000492806 ABCC4O15439 1325 aa21.14■□□□□ 0.97
CCDC13-208ENST00000492806 TRIM27P14373 513 aa21.14■□□□□ 0.97
CCDC13-208ENST00000492806 C3orf67Q6ZVT6 689 aa21.14■□□□□ 0.97
CCDC13-208ENST00000492806 UTYO14607 1347 aa21.13■□□□□ 0.97
CCDC13-208ENST00000492806 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
CCDC13-208ENST00000492806 CCDC152Q4G0S7 254 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms