RNA–Protein interactions for RNA: ENST00000492757.5

C1orf35-207, Transcript of chromosome 1 open reading frame 35, humanhuman

TSL 3

Gene C1orf35, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-207ENST00000492757 CCDC30Q5VVM6 783 aa27.37■■□□□ 1.97
C1orf35-207ENST00000492757 ANKRD13DQ6ZTN6 518 aa27.37■■□□□ 1.97
C1orf35-207ENST00000492757 NLRP10Q86W26 655 aa27.37■■□□□ 1.97
C1orf35-207ENST00000492757 MASTLQ96GX5 879 aa27.37■■□□□ 1.97
C1orf35-207ENST00000492757 RNF181Q9P0P0 153 aa27.37■■□□□ 1.97
C1orf35-207ENST00000492757 HSP90AB3PQ58FF7 597 aa27.36■■□□□ 1.97
C1orf35-207ENST00000492757 ZNF428Q96B54 188 aa27.36■■□□□ 1.97
C1orf35-207ENST00000492757 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
C1orf35-207ENST00000492757 PRPF40BQ6NWY9 871 aaKnown RBP27.35■■□□□ 1.97
C1orf35-207ENST00000492757 PPP1R42Q7Z4L9 355 aa27.35■■□□□ 1.97
C1orf35-207ENST00000492757 ZNF219Q9P2Y4 722 aaPredicted RBP27.35■■□□□ 1.97
C1orf35-207ENST00000492757 LAMB2P55268 1798 aa27.35■■□□□ 1.97
C1orf35-207ENST00000492757 NPR1P16066 1061 aa27.34■■□□□ 1.97
C1orf35-207ENST00000492757 RASSF7Q02833 373 aa27.34■■□□□ 1.97
C1orf35-207ENST00000492757 C3orf67Q6ZVT6 689 aa27.34■■□□□ 1.97
C1orf35-207ENST00000492757 UTP14AQ9BVJ6 771 aaKnown RBP27.34■■□□□ 1.97
C1orf35-207ENST00000492757 EXOSC9Q06265 439 aaKnown RBP27.33■■□□□ 1.97
C1orf35-207ENST00000492757 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
C1orf35-207ENST00000492757 C16orf71Q8IYS4 520 aaPredicted RBP27.33■■□□□ 1.97
C1orf35-207ENST00000492757 CNKSR1Q969H4 720 aa27.33■■□□□ 1.97
C1orf35-207ENST00000492757 FER1L6Q2WGJ9 1857 aa27.33■■□□□ 1.97
C1orf35-207ENST00000492757 C21orf2O43822 256 aa27.32■■□□□ 1.96
C1orf35-207ENST00000492757 SYNE4Q8N205 404 aa27.32■■□□□ 1.96
C1orf35-207ENST00000492757 ISCA1Q9BUE6 129 aa27.32■■□□□ 1.96
C1orf35-207ENST00000492757 KDM2BQ8NHM5 1336 aa27.32■■□□□ 1.96
C1orf35-207ENST00000492757 ATP5J2-PTCD1G3V325 749 aa27.31■■□□□ 1.96
C1orf35-207ENST00000492757 APLP1P51693 650 aa27.31■■□□□ 1.96
C1orf35-207ENST00000492757 PRELPP51888 382 aa27.31■■□□□ 1.96
C1orf35-207ENST00000492757 GOLGA2Q08379 1002 aa27.31■■□□□ 1.96
C1orf35-207ENST00000492757 MIER1Q8N108 512 aa27.31■■□□□ 1.96
C1orf35-207ENST00000492757 DDX60Q8IY21 1712 aaKnown RBP27.3■■□□□ 1.96
C1orf35-207ENST00000492757 NFKBIEO00221 500 aa27.3■■□□□ 1.96
C1orf35-207ENST00000492757 RIC3Q7Z5B4 369 aa27.3■■□□□ 1.96
C1orf35-207ENST00000492757 CCDC88AQ3V6T2 1871 aa27.3■■□□□ 1.96
C1orf35-207ENST00000492757 VAMP4O75379 141 aa27.29■■□□□ 1.96
C1orf35-207ENST00000492757 G2E3Q7L622 706 aa27.29■■□□□ 1.96
C1orf35-207ENST00000492757 STK31Q9BXU1 1019 aa27.29■■□□□ 1.96
C1orf35-207ENST00000492757 CHMP4AQ9BY43 222 aa27.29■■□□□ 1.96
C1orf35-207ENST00000492757 MYH16Q9H6N6 1097 aa27.29■■□□□ 1.96
C1orf35-207ENST00000492757 RNF123Q5XPI4 1314 aa27.28■■□□□ 1.96
C1orf35-207ENST00000492757 TRMT112Q9UI30 125 aaKnown RBP27.28■■□□□ 1.96
C1orf35-207ENST00000492757 SLC10A5Q5PT55 438 aa27.27■■□□□ 1.96
C1orf35-207ENST00000492757 C7orf43Q8WVR3 580 aa27.27■■□□□ 1.96
C1orf35-207ENST00000492757 HCLS1P14317 486 aaPredicted RBP27.26■■□□□ 1.95
C1orf35-207ENST00000492757 OLFM4Q6UX06 510 aa27.26■■□□□ 1.95
C1orf35-207ENST00000492757 RBM46Q8TBY0 533 aaKnown RBP27.26■■□□□ 1.95
C1orf35-207ENST00000492757 TIAM2Q8IVF5 1701 aa27.26■■□□□ 1.95
C1orf35-207ENST00000492757 SH3TC1Q8TE82 1336 aa27.25■■□□□ 1.95
C1orf35-207ENST00000492757 SLC4A2P04920 1241 aa27.25■■□□□ 1.95
C1orf35-207ENST00000492757 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
C1orf35-207ENST00000492757 MYD88Q99836 296 aa27.25■■□□□ 1.95
C1orf35-207ENST00000492757 CACNA1FO60840 1977 aa27.24■■□□□ 1.95
C1orf35-207ENST00000492757 HOXA10P31260 410 aaPredicted RBP27.24■■□□□ 1.95
C1orf35-207ENST00000492757 SLC51AQ86UW1 340 aa27.24■■□□□ 1.95
C1orf35-207ENST00000492757 MAP3K2Q9Y2U5 619 aa27.24■■□□□ 1.95
C1orf35-207ENST00000492757 DDX58O95786 925 aaKnown RBP27.23■■□□□ 1.95
C1orf35-207ENST00000492757 TRIM28Q13263 835 aaKnown RBP27.23■■□□□ 1.95
C1orf35-207ENST00000492757 FAM89AQ96GI7 184 aa27.23■■□□□ 1.95
C1orf35-207ENST00000492757 NLRP3Q96P20 1036 aa27.23■■□□□ 1.95
C1orf35-207ENST00000492757 ZC3H4Q9UPT8 1303 aaKnown RBP27.22■■□□□ 1.95
C1orf35-207ENST00000492757 WDR90Q96KV7 1748 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 PI4KAP2A4QPH2 592 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 LMNB1P20700 586 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 ALDH1B1P30837 517 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 PI4KAP1Q8N8J0 262 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 METTL22Q9BUU2 404 aaPredicted RBP27.22■■□□□ 1.95
C1orf35-207ENST00000492757 RRAGCQ9HB90 399 aa27.22■■□□□ 1.95
C1orf35-207ENST00000492757 RTL5Q5HYW3 569 aaPredicted RBP27.21■■□□□ 1.95
C1orf35-207ENST00000492757 KSR2Q6VAB6 950 aa27.21■■□□□ 1.95
C1orf35-207ENST00000492757 TAF1P21675 1872 aa27.2■■□□□ 1.94
C1orf35-207ENST00000492757 FLIIQ13045 1269 aa27.2■■□□□ 1.94
C1orf35-207ENST00000492757 SNED1Q8TER0 1413 aa27.2■■□□□ 1.94
C1orf35-207ENST00000492757 DICER1Q9UPY3 1922 aaKnown RBP27.2■■□□□ 1.94
C1orf35-207ENST00000492757 LTBP3Q9NS15 1303 aa27.19■■□□□ 1.94
C1orf35-207ENST00000492757 CCDC93Q567U6 631 aa27.19■■□□□ 1.94
C1orf35-207ENST00000492757 SOGA3Q5TF21 947 aa27.19■■□□□ 1.94
C1orf35-207ENST00000492757 IFFO2Q5TF58 517 aa27.19■■□□□ 1.94
C1orf35-207ENST00000492757 RBM17Q96I25 401 aaKnown RBP27.19■■□□□ 1.94
C1orf35-207ENST00000492757 CRAMP1Q96RY5 1269 aa27.19■■□□□ 1.94
C1orf35-207ENST00000492757 FSTL1Q12841 308 aa27.18■■□□□ 1.94
C1orf35-207ENST00000492757 CDCA7LQ96GN5 454 aa27.18■■□□□ 1.94
C1orf35-207ENST00000492757 TAOK3Q9H2K8 898 aa27.18■■□□□ 1.94
C1orf35-207ENST00000492757 COL4A1P02462 1669 aa27.17■■□□□ 1.94
C1orf35-207ENST00000492757 ABCC4O15439 1325 aa27.17■■□□□ 1.94
C1orf35-207ENST00000492757 E9PSI1 815 aa27.17■■□□□ 1.94
C1orf35-207ENST00000492757 IGKV5-2P06315 115 aa27.17■■□□□ 1.94
C1orf35-207ENST00000492757 SLFN5Q08AF3 891 aa27.17■■□□□ 1.94
C1orf35-207ENST00000492757 CCDC191Q8NCU4 936 aa27.16■■□□□ 1.94
C1orf35-207ENST00000492757 JARID2Q92833 1246 aaPredicted RBP27.16■■□□□ 1.94
C1orf35-207ENST00000492757 PPEF1O14829 653 aaPredicted RBP27.15■■□□□ 1.94
C1orf35-207ENST00000492757 ZBTB38Q8NAP3 1195 aaPredicted RBP27.15■■□□□ 1.94
C1orf35-207ENST00000492757 CWC25Q9NXE8 425 aaPredicted RBP27.15■■□□□ 1.94
C1orf35-207ENST00000492757 IRS4O14654 1257 aaPredicted RBP27.14■■□□□ 1.94
C1orf35-207ENST00000492757 FKBP5Q13451 457 aaPredicted RBP27.14■■□□□ 1.94
C1orf35-207ENST00000492757 CWF19L2Q2TBE0 894 aaKnown RBP27.14■■□□□ 1.94
C1orf35-207ENST00000492757 GLTPD2A6NH11 291 aa27.12■■□□□ 1.93
C1orf35-207ENST00000492757 PCCAP05165 728 aaPredicted RBP27.12■■□□□ 1.93
C1orf35-207ENST00000492757 FKBP4Q02790 459 aaKnown RBP eCLIP27.12■■□□□ 1.93
C1orf35-207ENST00000492757 DNAJC5GQ8N7S2 189 aa27.12■■□□□ 1.93
C1orf35-207ENST00000492757 SMC1BQ8NDV3 1235 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms