RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PLCB2Q00722 1185 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 CAVIN4Q5BKX8 364 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 FLAD1Q8NFF5 587 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ANO2Q9NQ90 1003 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 BABAM1Q9NWV8 329 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 MEGF6O75095 1541 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 NRXN3Q9Y4C0 1643 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 RPS6KA4O75676 772 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ALDH1L1O75891 902 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 HOXB7P09629 217 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 SLC4A8Q2Y0W8 1093 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ERC1Q8IUD2 1116 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ZSCAN29Q8IWY8 852 aaPredicted RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 POLR1AO95602 1720 aaPredicted RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 COL5A2P05997 1499 aaPredicted RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 MAP3K15Q6ZN16 1313 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 CYP19A1P11511 503 aaPredicted RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ITGA6P23229 1130 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 MCCP23508 829 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 GCKRQ14397 625 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 HSP90AA2PQ14568 343 aaPredicted RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 PARP10Q53GL7 1025 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 C2CD5Q86YS7 1000 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 LINC00116Q8NCU8 138 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
TRA2B-215ENST00000492417 CCDC191Q8NCU4 936 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 HMGB1P09429 215 aaKnown RBP5.43□□□□□ -1.54
TRA2B-215ENST00000492417 GIGYF2Q6Y7W6 1299 aaKnown RBP5.43□□□□□ -1.54
TRA2B-215ENST00000492417 ARHGAP27Q6ZUM4 889 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 PCDHB15Q9Y5E8 787 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 GJA3Q9Y6H8 435 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 CAMTA1Q9Y6Y1 1673 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 NEURL1BA8MQ27 555 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 NBPF26B4DH59 902 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 SLC5A1P13866 664 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 ERFEQ4G0M1 354 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 NBPF10Q6P3W6 841 aaKnown RBP5.43□□□□□ -1.54
TRA2B-215ENST00000492417 NBPF15Q8N660 670 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 ZNF526Q8TF50 670 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-215ENST00000492417 KIF1BPQ96EK5 621 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 ITSN1Q15811 1721 aa5.43□□□□□ -1.54
TRA2B-215ENST00000492417 PDE8AO60658 829 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 TIMM10P62072 90 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 GRM1Q13255 1194 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 JDP2Q8WYK2 163 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 ARHGAP45Q92619 1136 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 CHD2O14647 1828 aaKnown RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 RGPD8O14715 1765 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 UFL1O94874 794 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 ZNF853P0CG23 659 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 RRP12Q5JTH9 1297 aaKnown RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 TBC1D9BQ66K14 1250 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 GCC1Q96CN9 775 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 RBM17Q96I25 401 aaKnown RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 CLEC11AQ9Y240 323 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 PXDNQ92626 1479 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 MSNP26038 577 aaKnown RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 SLC4A3P48751 1232 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 ATP2B2Q01814 1243 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 ATP2B3Q16720 1220 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 LRRFIP1Q32MZ4 808 aaKnown RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 SUSD4Q5VX71 490 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 PAXIP1Q6ZW49 1069 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 CHD1LQ86WJ1 897 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 AMOTL1Q8IY63 956 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 SEC31BQ9NQW1 1179 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 AKAP2Q9Y2D5 859 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 KDM4AO75164 1064 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 IGHDP01880 384 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 SLC27A3Q5K4L6 730 aa5.42□□□□□ -1.54
TRA2B-215ENST00000492417 C16orf71Q8IYS4 520 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-215ENST00000492417 MAP2P11137 1827 aaKnown RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 RPS8P62241 208 aaKnown RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 SLC15A2Q16348 729 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 DZIP1Q86YF9 867 aaKnown RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 CNTROBQ8N137 903 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 LARGE2Q8N3Y3 721 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 KDRP35968 1356 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 NALCNQ8IZF0 1738 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 PNMA6EA0A0J9YXQ4 647 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 GOLIM4O00461 696 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 TFCP2Q12800 502 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 NFIXQ14938 502 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 CWC27Q6UX04 472 aaKnown RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 DPP8Q6V1X1 898 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 RHPN1Q8TCX5 695 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 USP44Q9H0E7 712 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 ANO8Q9HCE9 1232 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 NARFQ9UHQ1 456 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 PHLPP1O60346 1717 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 ZNF142P52746 1687 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-215ENST00000492417 CHRNA5P30532 468 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 ATP8B2P98198 1209 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 RUFY2Q8WXA3 655 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 ARID3AQ99856 593 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 GREM2Q9H772 168 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 SPON1Q9HCB6 807 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms