RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
RP9-204ENST00000492391 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 VAMP4O75379 141 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 HOXB7P09629 217 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
RP9-204ENST00000492391 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
RP9-204ENST00000492391 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
RP9-204ENST00000492391 LAMB2P55268 1798 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
RP9-204ENST00000492391 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 TNRC6CQ9HCJ0 1690 aaKnown RBP11.09□□□□□ -0.63
RP9-204ENST00000492391 PXDNLA1KZ92 1463 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 TCERG1O14776 1098 aaKnown RBP11.09□□□□□ -0.63
RP9-204ENST00000492391 ZPR1O75312 459 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 EXOSC9Q06265 439 aaKnown RBP11.09□□□□□ -0.63
RP9-204ENST00000492391 SLFN5Q08AF3 891 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
RP9-204ENST00000492391 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 COPS6Q7L5N1 327 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 G2E3Q7L622 706 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 CHD4Q14839 1912 aa11.09□□□□□ -0.63
RP9-204ENST00000492391 SLX4Q8IY92 1834 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 ARFGEF1Q9Y6D6 1849 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 A0A087WZG4 1122 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 POTEB2H3BUK9 544 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 POLD1P28340 1107 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 BICDL1Q6ZP65 573 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
RP9-204ENST00000492391 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 CD2APQ9Y5K6 639 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 SBF1O95248 1867 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 MAP3K15Q6ZN16 1313 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 UBN2Q6ZU65 1347 aa11.08□□□□□ -0.64
RP9-204ENST00000492391 DDX60Q8IY21 1712 aaKnown RBP11.07□□□□□ -0.64
RP9-204ENST00000492391 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 SERPINB2P05120 415 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 YBX3P16989 372 aaKnown RBP eCLIP11.07□□□□□ -0.64
RP9-204ENST00000492391 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
RP9-204ENST00000492391 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 PPP1R1BQ9UD71 204 aaPredicted RBP11.07□□□□□ -0.64
RP9-204ENST00000492391 COL4A1P02462 1669 aa11.07□□□□□ -0.64
RP9-204ENST00000492391 A0A0G2JLW4 131 aa11.06□□□□□ -0.64
RP9-204ENST00000492391 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
RP9-204ENST00000492391 PRR5LQ6MZQ0 368 aa11.06□□□□□ -0.64
RP9-204ENST00000492391 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
RP9-204ENST00000492391 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
RP9-204ENST00000492391 ATP10DQ9P241 1426 aa11.06□□□□□ -0.64
RP9-204ENST00000492391 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
RP9-204ENST00000492391 DPEP1P16444 411 aa11.05□□□□□ -0.64
RP9-204ENST00000492391 CHRNA5P30532 468 aa11.05□□□□□ -0.64
RP9-204ENST00000492391 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
RP9-204ENST00000492391 SUSD4Q5VX71 490 aa11.05□□□□□ -0.64
RP9-204ENST00000492391 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
RP9-204ENST00000492391 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
RP9-204ENST00000492391 DBF4Q9UBU7 674 aaPredicted RBP11.05□□□□□ -0.64
RP9-204ENST00000492391 C7P10643 843 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 PYGBP11216 843 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 GPTP24298 496 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 SLC51AQ86UW1 340 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 WWC3Q9ULE0 1092 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
RP9-204ENST00000492391 ADCY9O60503 1353 aa11.03□□□□□ -0.64
RP9-204ENST00000492391 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
RP9-204ENST00000492391 KLRG2A4D1S0 409 aaPredicted RBP11.03□□□□□ -0.64
RP9-204ENST00000492391 SETDB2Q96T68 719 aa11.03□□□□□ -0.64
RP9-204ENST00000492391 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
RP9-204ENST00000492391 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
RP9-204ENST00000492391 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
RP9-204ENST00000492391 FER1L6Q2WGJ9 1857 aa11.02□□□□□ -0.64
RP9-204ENST00000492391 NTSR2O95665 410 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
RP9-204ENST00000492391 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
RP9-204ENST00000492391 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 TGFB2P61812 414 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 MYH3P11055 1940 aa11.01□□□□□ -0.65
RP9-204ENST00000492391 E9PSI1 815 aa11□□□□□ -0.65
RP9-204ENST00000492391 PRELPP51888 382 aa11□□□□□ -0.65
RP9-204ENST00000492391 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
RP9-204ENST00000492391 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms