RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 C10orf71Q711Q0 1435 aa29.49■■■□□ 2.31
SCN5A-213ENST00000491944 NUTM1Q86Y26 1132 aa29.49■■■□□ 2.31
SCN5A-213ENST00000491944 LINS1Q8NG48 757 aa29.49■■■□□ 2.31
SCN5A-213ENST00000491944 ARHGAP45Q92619 1136 aa29.49■■■□□ 2.31
SCN5A-213ENST00000491944 TRMT112Q9UI30 125 aaKnown RBP29.49■■■□□ 2.31
SCN5A-213ENST00000491944 NEURL1BA8MQ27 555 aa29.48■■■□□ 2.31
SCN5A-213ENST00000491944 FHDC1Q9C0D6 1143 aaPredicted RBP29.48■■■□□ 2.31
SCN5A-213ENST00000491944 KIF13BQ9NQT8 1826 aa29.48■■■□□ 2.31
SCN5A-213ENST00000491944 BEND3Q5T5X7 828 aa29.47■■■□□ 2.31
SCN5A-213ENST00000491944 ZKSCAN2Q63HK3 967 aa29.47■■■□□ 2.31
SCN5A-213ENST00000491944 PXDNLA1KZ92 1463 aa29.46■■■□□ 2.31
SCN5A-213ENST00000491944 ERFEQ4G0M1 354 aa29.46■■■□□ 2.31
SCN5A-213ENST00000491944 ATF7IPQ6VMQ6 1270 aa29.46■■■□□ 2.31
SCN5A-213ENST00000491944 TRIM27P14373 513 aa29.45■■■□□ 2.31
SCN5A-213ENST00000491944 SRCIN1Q9C0H9 1055 aa29.45■■■□□ 2.31
SCN5A-213ENST00000491944 CD2APQ9Y5K6 639 aa29.45■■■□□ 2.31
SCN5A-213ENST00000491944 ANKRD31Q8N7Z5 1873 aa29.45■■■□□ 2.3
SCN5A-213ENST00000491944 RNF123Q5XPI4 1314 aa29.44■■■□□ 2.3
SCN5A-213ENST00000491944 SH3TC1Q8TE82 1336 aa29.44■■■□□ 2.3
SCN5A-213ENST00000491944 N4BP2Q86UW6 1770 aaPredicted RBP29.43■■■□□ 2.3
SCN5A-213ENST00000491944 ABCC12Q96J65 1359 aa29.43■■■□□ 2.3
SCN5A-213ENST00000491944 RTL5Q5HYW3 569 aaPredicted RBP29.43■■■□□ 2.3
SCN5A-213ENST00000491944 FAM89AQ96GI7 184 aa29.43■■■□□ 2.3
SCN5A-213ENST00000491944 GCKRQ14397 625 aa29.42■■■□□ 2.3
SCN5A-213ENST00000491944 SYNE4Q8N205 404 aa29.42■■■□□ 2.3
SCN5A-213ENST00000491944 ZBTB38Q8NAP3 1195 aaPredicted RBP29.42■■■□□ 2.3
SCN5A-213ENST00000491944 CLUAP1Q96AJ1 413 aa29.42■■■□□ 2.3
SCN5A-213ENST00000491944 TNNQ9UQP3 1299 aa29.42■■■□□ 2.3
SCN5A-213ENST00000491944 ALDH1L1O75891 902 aa29.41■■■□□ 2.3
SCN5A-213ENST00000491944 JARID2Q92833 1246 aaPredicted RBP29.41■■■□□ 2.3
SCN5A-213ENST00000491944 BRIP1Q9BX63 1249 aa29.41■■■□□ 2.3
SCN5A-213ENST00000491944 SRCAPQ6ZRS2 3230 aa29.4■■■□□ 2.3
SCN5A-213ENST00000491944 ABCC4O15439 1325 aa29.4■■■□□ 2.3
SCN5A-213ENST00000491944 PCCAP05165 728 aaPredicted RBP29.39■■■□□ 2.3
SCN5A-213ENST00000491944 CCT4P50991 539 aaKnown RBP29.39■■■□□ 2.3
SCN5A-213ENST00000491944 SYT17Q9BSW7 474 aa29.39■■■□□ 2.3
SCN5A-213ENST00000491944 TNRC6CQ9HCJ0 1690 aaKnown RBP29.39■■■□□ 2.3
SCN5A-213ENST00000491944 HCLS1P14317 486 aaPredicted RBP29.39■■■□□ 2.29
SCN5A-213ENST00000491944 PDE6BP35913 854 aa29.39■■■□□ 2.29
SCN5A-213ENST00000491944 FTSJ3Q8IY81 847 aaKnown RBP29.39■■■□□ 2.29
SCN5A-213ENST00000491944 NLGN2Q8NFZ4 835 aa29.39■■■□□ 2.29
SCN5A-213ENST00000491944 UBE3BQ7Z3V4 1068 aa29.38■■■□□ 2.29
SCN5A-213ENST00000491944 DDX60Q8IY21 1712 aaKnown RBP29.38■■■□□ 2.29
SCN5A-213ENST00000491944 KIAA1551Q9HCM1 1747 aa29.37■■■□□ 2.29
SCN5A-213ENST00000491944 LAMB2P55268 1798 aa29.37■■■□□ 2.29
SCN5A-213ENST00000491944 IRS4O14654 1257 aaPredicted RBP29.37■■■□□ 2.29
SCN5A-213ENST00000491944 PLIN1O60240 522 aa29.37■■■□□ 2.29
SCN5A-213ENST00000491944 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.37■■■□□ 2.29
SCN5A-213ENST00000491944 C9orf78Q9NZ63 289 aaPredicted RBP29.37■■■□□ 2.29
SCN5A-213ENST00000491944 TGFB2P61812 414 aa29.36■■■□□ 2.29
SCN5A-213ENST00000491944 SLC10A5Q5PT55 438 aa29.36■■■□□ 2.29
SCN5A-213ENST00000491944 DZIP1LQ8IYY4 767 aaKnown RBP29.36■■■□□ 2.29
SCN5A-213ENST00000491944 RIC1Q4ADV7 1423 aa29.35■■■□□ 2.29
SCN5A-213ENST00000491944 H7C1W4 665 aa29.35■■■□□ 2.29
SCN5A-213ENST00000491944 CHRNA5P30532 468 aa29.35■■■□□ 2.29
SCN5A-213ENST00000491944 C2CD5Q86YS7 1000 aa29.35■■■□□ 2.29
SCN5A-213ENST00000491944 COL11A2P13942 1736 aaPredicted RBP29.35■■■□□ 2.29
SCN5A-213ENST00000491944 A0A0G2JLW4 131 aa29.34■■■□□ 2.29
SCN5A-213ENST00000491944 GRM8O00222 908 aa29.34■■■□□ 2.29
SCN5A-213ENST00000491944 DPEP1P16444 411 aa29.34■■■□□ 2.29
SCN5A-213ENST00000491944 INTS3Q68E01 1043 aaKnown RBP29.34■■■□□ 2.29
SCN5A-213ENST00000491944 H0YIN7 160 aa29.33■■■□□ 2.29
SCN5A-213ENST00000491944 HSP90B1P14625 803 aaKnown RBP29.33■■■□□ 2.29
SCN5A-213ENST00000491944 NLRP3Q96P20 1036 aa29.33■■■□□ 2.29
SCN5A-213ENST00000491944 CDHR2Q9BYE9 1310 aa29.33■■■□□ 2.29
SCN5A-213ENST00000491944 MS4A1P11836 297 aa29.32■■■□□ 2.28
SCN5A-213ENST00000491944 C3orf67Q6ZVT6 689 aa29.32■■■□□ 2.28
SCN5A-213ENST00000491944 TMEM57Q8N5G2 664 aa29.32■■■□□ 2.28
SCN5A-213ENST00000491944 PDZRN3Q9UPQ7 1066 aa29.32■■■□□ 2.28
SCN5A-213ENST00000491944 DLEC1Q9Y238 1755 aa29.31■■■□□ 2.28
SCN5A-213ENST00000491944 RLBP1P12271 317 aa29.31■■■□□ 2.28
SCN5A-213ENST00000491944 MYH3P11055 1940 aa29.3■■■□□ 2.28
SCN5A-213ENST00000491944 CASP7P55210 303 aa29.3■■■□□ 2.28
SCN5A-213ENST00000491944 PANK1Q8TE04 598 aa29.3■■■□□ 2.28
SCN5A-213ENST00000491944 KLRG2A4D1S0 409 aaPredicted RBP29.29■■■□□ 2.28
SCN5A-213ENST00000491944 PDE8AO60658 829 aa29.28■■■□□ 2.28
SCN5A-213ENST00000491944 ITPRIPQ8IWB1 547 aa29.28■■■□□ 2.28
SCN5A-213ENST00000491944 RPGRQ92834 1020 aaKnown RBP29.28■■■□□ 2.28
SCN5A-213ENST00000491944 ZNF622Q969S3 477 aaKnown RBP eCLIP29.28■■■□□ 2.28
SCN5A-213ENST00000491944 USP44Q9H0E7 712 aa29.28■■■□□ 2.28
SCN5A-213ENST00000491944 WWC3Q9ULE0 1092 aa29.28■■■□□ 2.28
SCN5A-213ENST00000491944 NBPF7P0C2Y1 421 aaPredicted RBP29.27■■■□□ 2.28
SCN5A-213ENST00000491944 SRGNP10124 158 aa29.27■■■□□ 2.28
SCN5A-213ENST00000491944 RRP1P56182 461 aaKnown RBP29.27■■■□□ 2.28
SCN5A-213ENST00000491944 KCNA3P22001 575 aa29.26■■■□□ 2.28
SCN5A-213ENST00000491944 CRY2Q49AN0 593 aa29.26■■■□□ 2.28
SCN5A-213ENST00000491944 MASTLQ96GX5 879 aa29.26■■■□□ 2.28
SCN5A-213ENST00000491944 BRCA1P38398 1863 aaKnown RBP29.26■■■□□ 2.28
SCN5A-213ENST00000491944 UTYO14607 1347 aa29.26■■■□□ 2.27
SCN5A-213ENST00000491944 CACNA1SQ13698 1873 aa29.26■■■□□ 2.27
SCN5A-213ENST00000491944 NPR1P16066 1061 aa29.26■■■□□ 2.27
SCN5A-213ENST00000491944 CTSWP56202 376 aa29.25■■■□□ 2.27
SCN5A-213ENST00000491944 STYK1Q6J9G0 422 aa29.25■■■□□ 2.27
SCN5A-213ENST00000491944 PIM2Q9P1W9 311 aa29.25■■■□□ 2.27
SCN5A-213ENST00000491944 MEIS3Q99687 375 aa29.24■■■□□ 2.27
SCN5A-213ENST00000491944 PLA2G12BQ9BX93 195 aa29.24■■■□□ 2.27
SCN5A-213ENST00000491944 UBTFL1P0CB47 393 aaPredicted RBP29.23■■■□□ 2.27
SCN5A-213ENST00000491944 SF3B3Q15393 1217 aaKnown RBP29.23■■■□□ 2.27
SCN5A-213ENST00000491944 C20orf194Q5TEA3 1177 aa29.23■■■□□ 2.27
SCN5A-213ENST00000491944 RBM17Q96I25 401 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms