RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
USF1-206ENST00000491629 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
USF1-206ENST00000491629 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
USF1-206ENST00000491629 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
USF1-206ENST00000491629 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
USF1-206ENST00000491629 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
USF1-206ENST00000491629 EPS15P42566 896 aa17.67■□□□□ 0.42
USF1-206ENST00000491629 TAF7Q15545 349 aaPredicted RBP17.67■□□□□ 0.42
USF1-206ENST00000491629 C3orf67Q6ZVT6 689 aa17.67■□□□□ 0.42
USF1-206ENST00000491629 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
USF1-206ENST00000491629 DDX21Q9NR30 783 aaKnown RBP eCLIP17.67■□□□□ 0.42
USF1-206ENST00000491629 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
USF1-206ENST00000491629 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
USF1-206ENST00000491629 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
USF1-206ENST00000491629 GJA3Q9Y6H8 435 aa17.66■□□□□ 0.42
USF1-206ENST00000491629 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
USF1-206ENST00000491629 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
USF1-206ENST00000491629 CST9Q5W186 159 aa17.65■□□□□ 0.42
USF1-206ENST00000491629 JDP2Q8WYK2 163 aa17.65■□□□□ 0.42
USF1-206ENST00000491629 ABHD8Q96I13 439 aa17.65■□□□□ 0.42
USF1-206ENST00000491629 MAP3K15Q6ZN16 1313 aa17.65■□□□□ 0.42
USF1-206ENST00000491629 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
USF1-206ENST00000491629 GPTP24298 496 aa17.64■□□□□ 0.41
USF1-206ENST00000491629 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
USF1-206ENST00000491629 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
USF1-206ENST00000491629 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
USF1-206ENST00000491629 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
USF1-206ENST00000491629 TRAF5O00463 557 aa17.63■□□□□ 0.41
USF1-206ENST00000491629 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
USF1-206ENST00000491629 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
USF1-206ENST00000491629 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
USF1-206ENST00000491629 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
USF1-206ENST00000491629 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
USF1-206ENST00000491629 TNRC18O15417 2968 aaPredicted RBP17.62■□□□□ 0.41
USF1-206ENST00000491629 NTSR2O95665 410 aa17.62■□□□□ 0.41
USF1-206ENST00000491629 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
USF1-206ENST00000491629 MAP2K1Q02750 393 aaPredicted RBP17.62■□□□□ 0.41
USF1-206ENST00000491629 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
USF1-206ENST00000491629 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
USF1-206ENST00000491629 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
USF1-206ENST00000491629 ZBTB3Q9H5J0 574 aa17.62■□□□□ 0.41
USF1-206ENST00000491629 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
USF1-206ENST00000491629 LARGE2Q8N3Y3 721 aa17.61■□□□□ 0.41
USF1-206ENST00000491629 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
USF1-206ENST00000491629 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
USF1-206ENST00000491629 MYL6BP14649 208 aa17.6■□□□□ 0.41
USF1-206ENST00000491629 LRP10Q7Z4F1 713 aa17.6■□□□□ 0.41
USF1-206ENST00000491629 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
USF1-206ENST00000491629 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
USF1-206ENST00000491629 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
USF1-206ENST00000491629 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
USF1-206ENST00000491629 USP50Q70EL3 339 aaPredicted RBP17.59■□□□□ 0.41
USF1-206ENST00000491629 PLEKHF1Q96S99 279 aa17.59■□□□□ 0.41
USF1-206ENST00000491629 TLL2Q9Y6L7 1015 aa17.59■□□□□ 0.41
USF1-206ENST00000491629 AOC2O75106 756 aa17.58■□□□□ 0.4
USF1-206ENST00000491629 AOC3Q16853 763 aa17.58■□□□□ 0.4
USF1-206ENST00000491629 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
USF1-206ENST00000491629 RBM17Q96I25 401 aaKnown RBP17.58■□□□□ 0.4
USF1-206ENST00000491629 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
USF1-206ENST00000491629 TSKSQ9UJT2 592 aa17.58■□□□□ 0.4
USF1-206ENST00000491629 GRM1Q13255 1194 aa17.57■□□□□ 0.4
USF1-206ENST00000491629 PDIA6Q15084 440 aa17.57■□□□□ 0.4
USF1-206ENST00000491629 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
USF1-206ENST00000491629 GPRC5DQ9NZD1 345 aa17.57■□□□□ 0.4
USF1-206ENST00000491629 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
USF1-206ENST00000491629 DDX60Q8IY21 1712 aaKnown RBP17.56■□□□□ 0.4
USF1-206ENST00000491629 PPIP5K2O43314 1243 aa17.56■□□□□ 0.4
USF1-206ENST00000491629 SLC34A2O95436 690 aa17.56■□□□□ 0.4
USF1-206ENST00000491629 CXCL9Q07325 125 aa17.56■□□□□ 0.4
USF1-206ENST00000491629 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
USF1-206ENST00000491629 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
USF1-206ENST00000491629 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
USF1-206ENST00000491629 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 ABCC4O15439 1325 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 NIM1KQ8IY84 436 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
USF1-206ENST00000491629 COL4A1P02462 1669 aa17.55■□□□□ 0.4
USF1-206ENST00000491629 ECE1P42892 770 aa17.54■□□□□ 0.4
USF1-206ENST00000491629 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
USF1-206ENST00000491629 HIRAP54198 1017 aaPredicted RBP17.54■□□□□ 0.4
USF1-206ENST00000491629 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
USF1-206ENST00000491629 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
USF1-206ENST00000491629 GLIS2Q9BZE0 524 aaPredicted RBP17.54■□□□□ 0.4
USF1-206ENST00000491629 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
USF1-206ENST00000491629 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
USF1-206ENST00000491629 SHTN1A0MZ66 631 aa17.53■□□□□ 0.4
USF1-206ENST00000491629 ANXA1P04083 346 aa17.53■□□□□ 0.4
USF1-206ENST00000491629 RGS19P49795 217 aa17.53■□□□□ 0.4
USF1-206ENST00000491629 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
USF1-206ENST00000491629 PDE4DIPQ5VU43 2346 aa17.52■□□□□ 0.4
USF1-206ENST00000491629 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.4
USF1-206ENST00000491629 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
USF1-206ENST00000491629 ZNRF3Q9ULT6 936 aa17.52■□□□□ 0.4
USF1-206ENST00000491629 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 YDJCA8MPS7 323 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 CELF2O95319 508 aaKnown RBP17.51■□□□□ 0.39
USF1-206ENST00000491629 MAP2K2P36507 400 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms