RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
NCK1-211ENST00000491539 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
NCK1-211ENST00000491539 SCNN1DP51172 638 aa18.47■□□□□ 0.55
NCK1-211ENST00000491539 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
NCK1-211ENST00000491539 GPC2Q8N158 579 aa18.47■□□□□ 0.55
NCK1-211ENST00000491539 PLEKHF1Q96S99 279 aa18.47■□□□□ 0.55
NCK1-211ENST00000491539 COL4A1P02462 1669 aa18.47■□□□□ 0.55
NCK1-211ENST00000491539 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
NCK1-211ENST00000491539 SLC34A2O95436 690 aa18.46■□□□□ 0.55
NCK1-211ENST00000491539 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
NCK1-211ENST00000491539 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
NCK1-211ENST00000491539 RTF1Q92541 710 aaKnown RBP18.46■□□□□ 0.55
NCK1-211ENST00000491539 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
NCK1-211ENST00000491539 TRAF5O00463 557 aa18.45■□□□□ 0.54
NCK1-211ENST00000491539 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
NCK1-211ENST00000491539 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
NCK1-211ENST00000491539 RTKN2Q8IZC4 609 aa18.45■□□□□ 0.54
NCK1-211ENST00000491539 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
NCK1-211ENST00000491539 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
NCK1-211ENST00000491539 PSMD1Q99460 953 aa18.44■□□□□ 0.54
NCK1-211ENST00000491539 TSKSQ9UJT2 592 aa18.44■□□□□ 0.54
NCK1-211ENST00000491539 EPS15P42566 896 aa18.43■□□□□ 0.54
NCK1-211ENST00000491539 CYP4F22Q6NT55 531 aa18.43■□□□□ 0.54
NCK1-211ENST00000491539 TPTE2Q6XPS3 522 aa18.43■□□□□ 0.54
NCK1-211ENST00000491539 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
NCK1-211ENST00000491539 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
NCK1-211ENST00000491539 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
NCK1-211ENST00000491539 GRM1Q13255 1194 aa18.42■□□□□ 0.54
NCK1-211ENST00000491539 POLR2AP24928 1970 aaKnown RBP18.42■□□□□ 0.54
NCK1-211ENST00000491539 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
NCK1-211ENST00000491539 NEFMP07197 916 aa18.41■□□□□ 0.54
NCK1-211ENST00000491539 NFE2L2Q16236 605 aa18.41■□□□□ 0.54
NCK1-211ENST00000491539 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
NCK1-211ENST00000491539 CAPNS2Q96L46 248 aa18.41■□□□□ 0.54
NCK1-211ENST00000491539 RGL2O15211 777 aa18.4■□□□□ 0.54
NCK1-211ENST00000491539 AOC2O75106 756 aa18.4■□□□□ 0.54
NCK1-211ENST00000491539 GPTP24298 496 aa18.4■□□□□ 0.54
NCK1-211ENST00000491539 CST9Q5W186 159 aa18.4■□□□□ 0.54
NCK1-211ENST00000491539 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
NCK1-211ENST00000491539 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
NCK1-211ENST00000491539 PNNQ9H307 717 aaKnown RBP18.4■□□□□ 0.54
NCK1-211ENST00000491539 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
NCK1-211ENST00000491539 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
NCK1-211ENST00000491539 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
NCK1-211ENST00000491539 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
NCK1-211ENST00000491539 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
NCK1-211ENST00000491539 NTSR2O95665 410 aa18.38■□□□□ 0.53
NCK1-211ENST00000491539 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
NCK1-211ENST00000491539 JDP2Q8WYK2 163 aa18.38■□□□□ 0.53
NCK1-211ENST00000491539 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
NCK1-211ENST00000491539 MAPK8IP3Q9UPT6 1336 aa18.38■□□□□ 0.53
NCK1-211ENST00000491539 SCN9AQ15858 1988 aa18.37■□□□□ 0.53
NCK1-211ENST00000491539 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
NCK1-211ENST00000491539 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
NCK1-211ENST00000491539 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
NCK1-211ENST00000491539 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
NCK1-211ENST00000491539 PSME4Q14997 1843 aa18.37■□□□□ 0.53
NCK1-211ENST00000491539 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
NCK1-211ENST00000491539 HOXA10P31260 410 aaPredicted RBP18.36■□□□□ 0.53
NCK1-211ENST00000491539 AOC3Q16853 763 aa18.36■□□□□ 0.53
NCK1-211ENST00000491539 RPGRQ92834 1020 aaKnown RBP18.36■□□□□ 0.53
NCK1-211ENST00000491539 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
NCK1-211ENST00000491539 PNISRQ8TF01 805 aaKnown RBP18.35■□□□□ 0.53
NCK1-211ENST00000491539 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
NCK1-211ENST00000491539 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
NCK1-211ENST00000491539 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
NCK1-211ENST00000491539 ABCC4O15439 1325 aa18.34■□□□□ 0.53
NCK1-211ENST00000491539 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
NCK1-211ENST00000491539 MYL6BP14649 208 aa18.34■□□□□ 0.53
NCK1-211ENST00000491539 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
NCK1-211ENST00000491539 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
NCK1-211ENST00000491539 PRKRIP1Q9H875 184 aaPredicted RBP18.34■□□□□ 0.53
NCK1-211ENST00000491539 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
NCK1-211ENST00000491539 PPIP5K2O43314 1243 aa18.33■□□□□ 0.52
NCK1-211ENST00000491539 USP50Q70EL3 339 aaPredicted RBP18.33■□□□□ 0.52
NCK1-211ENST00000491539 GLIS2Q9BZE0 524 aaPredicted RBP18.33■□□□□ 0.52
NCK1-211ENST00000491539 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
NCK1-211ENST00000491539 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
NCK1-211ENST00000491539 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
NCK1-211ENST00000491539 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
NCK1-211ENST00000491539 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
NCK1-211ENST00000491539 NIM1KQ8IY84 436 aa18.32■□□□□ 0.52
NCK1-211ENST00000491539 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
NCK1-211ENST00000491539 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
NCK1-211ENST00000491539 TMPOP42166 694 aaKnown RBP18.31■□□□□ 0.52
NCK1-211ENST00000491539 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
NCK1-211ENST00000491539 RIPK4P57078 832 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
NCK1-211ENST00000491539 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 KIF6Q6ZMV9 814 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 TRPM4Q8TD43 1214 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
NCK1-211ENST00000491539 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
NCK1-211ENST00000491539 ECE1P42892 770 aa18.3■□□□□ 0.52
NCK1-211ENST00000491539 SAPCD2Q86UD0 394 aa18.3■□□□□ 0.52
NCK1-211ENST00000491539 ZIC5Q96T25 663 aa18.3■□□□□ 0.52
NCK1-211ENST00000491539 MCOLN1Q9GZU1 580 aa18.3■□□□□ 0.52
NCK1-211ENST00000491539 ADARB2Q9NS39 739 aaKnown RBP18.3■□□□□ 0.52
NCK1-211ENST00000491539 PDE4DIPQ5VU43 2346 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms