RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 FER1L6Q2WGJ9 1857 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 LMNB1P20700 586 aa19.67■□□□□ 0.74
COL27A1-206ENST00000490831 PRELPP51888 382 aa19.67■□□□□ 0.74
COL27A1-206ENST00000490831 SOGA3Q5TF21 947 aa19.67■□□□□ 0.74
COL27A1-206ENST00000490831 UTP14AQ9BVJ6 771 aaKnown RBP19.67■□□□□ 0.74
COL27A1-206ENST00000490831 RNF181Q9P0P0 153 aa19.67■□□□□ 0.74
COL27A1-206ENST00000490831 LTBP3Q9NS15 1303 aa19.67■□□□□ 0.74
COL27A1-206ENST00000490831 ZC3H4Q9UPT8 1303 aaKnown RBP19.67■□□□□ 0.74
COL27A1-206ENST00000490831 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-206ENST00000490831 CCDC30Q5VVM6 783 aa19.66■□□□□ 0.74
COL27A1-206ENST00000490831 ALDH1B1P30837 517 aa19.65■□□□□ 0.74
COL27A1-206ENST00000490831 ISCA1Q9BUE6 129 aa19.65■□□□□ 0.74
COL27A1-206ENST00000490831 CACNA1SQ13698 1873 aa19.65■□□□□ 0.74
COL27A1-206ENST00000490831 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
COL27A1-206ENST00000490831 PHAXQ9H814 394 aaKnown RBP19.64■□□□□ 0.73
COL27A1-206ENST00000490831 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
COL27A1-206ENST00000490831 ZNF526Q8TF50 670 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-206ENST00000490831 C1QTNF8P60827 252 aa19.62■□□□□ 0.73
COL27A1-206ENST00000490831 TWISTNBQ3B726 338 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-206ENST00000490831 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
COL27A1-206ENST00000490831 CRAMP1Q96RY5 1269 aa19.62■□□□□ 0.73
COL27A1-206ENST00000490831 ZNF219Q9P2Y4 722 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-206ENST00000490831 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-206ENST00000490831 SNED1Q8TER0 1413 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 SH3TC1Q8TE82 1336 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 CCDC93Q567U6 631 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 RPGRQ92834 1020 aaKnown RBP19.61■□□□□ 0.73
COL27A1-206ENST00000490831 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 TAOK3Q9H2K8 898 aa19.61■□□□□ 0.73
COL27A1-206ENST00000490831 TRMT112Q9UI30 125 aaKnown RBP19.61■□□□□ 0.73
COL27A1-206ENST00000490831 KIF3CO14782 793 aa19.6■□□□□ 0.73
COL27A1-206ENST00000490831 SPINK5Q9NQ38 1064 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-206ENST00000490831 DICER1Q9UPY3 1922 aaKnown RBP19.6■□□□□ 0.73
COL27A1-206ENST00000490831 CCDC88AQ3V6T2 1871 aa19.6■□□□□ 0.73
COL27A1-206ENST00000490831 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
COL27A1-206ENST00000490831 RIC3Q7Z5B4 369 aa19.59■□□□□ 0.73
COL27A1-206ENST00000490831 RTKN2Q8IZC4 609 aa19.59■□□□□ 0.73
COL27A1-206ENST00000490831 SYNE4Q8N205 404 aa19.59■□□□□ 0.73
COL27A1-206ENST00000490831 RBM17Q96I25 401 aaKnown RBP19.59■□□□□ 0.73
COL27A1-206ENST00000490831 ATP5J2-PTCD1G3V325 749 aa19.58■□□□□ 0.72
COL27A1-206ENST00000490831 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
COL27A1-206ENST00000490831 CC2D2BQ6DHV5 1058 aa19.58■□□□□ 0.72
COL27A1-206ENST00000490831 STK31Q9BXU1 1019 aa19.58■□□□□ 0.72
COL27A1-206ENST00000490831 TIAM2Q8IVF5 1701 aa19.58■□□□□ 0.72
COL27A1-206ENST00000490831 LAMB2P55268 1798 aa19.57■□□□□ 0.72
COL27A1-206ENST00000490831 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
COL27A1-206ENST00000490831 VAMP4O75379 141 aa19.57■□□□□ 0.72
COL27A1-206ENST00000490831 HCLS1P14317 486 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-206ENST00000490831 FKBP4Q02790 459 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL27A1-206ENST00000490831 OLFM4Q6UX06 510 aa19.57■□□□□ 0.72
COL27A1-206ENST00000490831 METTL22Q9BUU2 404 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-206ENST00000490831 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
COL27A1-206ENST00000490831 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
COL27A1-206ENST00000490831 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
COL27A1-206ENST00000490831 NMRK2Q9NPI5 230 aa19.56■□□□□ 0.72
COL27A1-206ENST00000490831 GLTPD2A6NH11 291 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 KSR2Q6VAB6 950 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 DDX60Q8IY21 1712 aaKnown RBP19.55■□□□□ 0.72
COL27A1-206ENST00000490831 CCDC191Q8NCU4 936 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 FAM89AQ96GI7 184 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 PSMD1Q99460 953 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 CACNA1FO60840 1977 aa19.55■□□□□ 0.72
COL27A1-206ENST00000490831 ABCC4O15439 1325 aa19.54■□□□□ 0.72
COL27A1-206ENST00000490831 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-206ENST00000490831 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
COL27A1-206ENST00000490831 ZBTB38Q8NAP3 1195 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-206ENST00000490831 MYD88Q99836 296 aa19.54■□□□□ 0.72
COL27A1-206ENST00000490831 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
COL27A1-206ENST00000490831 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
COL27A1-206ENST00000490831 SF3B3Q15393 1217 aaKnown RBP19.53■□□□□ 0.72
COL27A1-206ENST00000490831 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
COL27A1-206ENST00000490831 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
COL27A1-206ENST00000490831 BBOX1O75936 387 aa19.52■□□□□ 0.72
COL27A1-206ENST00000490831 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-206ENST00000490831 G2E3Q7L622 706 aa19.52■□□□□ 0.72
COL27A1-206ENST00000490831 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
COL27A1-206ENST00000490831 IRS4O14654 1257 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-206ENST00000490831 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
COL27A1-206ENST00000490831 FLIIQ13045 1269 aa19.51■□□□□ 0.71
COL27A1-206ENST00000490831 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
COL27A1-206ENST00000490831 ZNF277Q9NRM2 450 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-206ENST00000490831 CWC25Q9NXE8 425 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-206ENST00000490831 TOMM70O94826 608 aa19.5■□□□□ 0.71
COL27A1-206ENST00000490831 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
COL27A1-206ENST00000490831 GRAPQ13588 217 aa19.5■□□□□ 0.71
COL27A1-206ENST00000490831 DPY19L2Q6NUT2 758 aa19.5■□□□□ 0.71
COL27A1-206ENST00000490831 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-206ENST00000490831 ZNF428Q96B54 188 aa19.5■□□□□ 0.71
COL27A1-206ENST00000490831 WDR90Q96KV7 1748 aa19.49■□□□□ 0.71
COL27A1-206ENST00000490831 IARSP41252 1262 aaKnown RBP19.49■□□□□ 0.71
COL27A1-206ENST00000490831 TMC4Q7Z404 712 aa19.49■□□□□ 0.71
COL27A1-206ENST00000490831 SLC51AQ86UW1 340 aa19.49■□□□□ 0.71
COL27A1-206ENST00000490831 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
COL27A1-206ENST00000490831 RRAGCQ9HB90 399 aa19.49■□□□□ 0.71
COL27A1-206ENST00000490831 CDHR2Q9BYE9 1310 aa19.48■□□□□ 0.71
COL27A1-206ENST00000490831 E9PSI1 815 aa19.47■□□□□ 0.71
COL27A1-206ENST00000490831 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
COL27A1-206ENST00000490831 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms