RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 C1orf216Q8TAB5 229 aa7.14□□□□□ -1.27
CSTF1-205ENST00000490539 NEO1Q92859 1461 aa7.14□□□□□ -1.27
CSTF1-205ENST00000490539 AIDAQ96BJ3 306 aa7.14□□□□□ -1.27
CSTF1-205ENST00000490539 CFAP74Q9C0B2 1584 aa7.14□□□□□ -1.27
CSTF1-205ENST00000490539 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
CSTF1-205ENST00000490539 FANCAO15360 1455 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 CNTNAP5Q8WYK1 1306 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 PLA2G4AP47712 749 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 MTFR1Q15390 333 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 BEND7Q8N7W2 519 aaPredicted RBP7.13□□□□□ -1.27
CSTF1-205ENST00000490539 TRERF1Q96PN7 1200 aa7.13□□□□□ -1.27
CSTF1-205ENST00000490539 PLCH2O75038 1416 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 CCNB3Q8WWL7 1395 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 FAM196BA6NMK8 535 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 ZBTB7BO15156 539 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 TATP17735 454 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 GAS6Q14393 721 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 LBRQ14739 615 aaKnown RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 EFHC2Q5JST6 749 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 CFAP70Q5T0N1 1121 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 PCGF6Q9BYE7 350 aa7.12□□□□□ -1.27
CSTF1-205ENST00000490539 SCHIP1Q9P0W5 487 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 CFDP1Q9UEE9 299 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-205ENST00000490539 ARHGAP5Q13017 1502 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSTF1-205ENST00000490539 ARAP3Q8WWN8 1544 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 AKNAQ7Z591 1439 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 PROCP04070 461 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 ITGB2P05107 769 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 NUCKS1Q9H1E3 243 aaKnown RBP7.11□□□□□ -1.27
CSTF1-205ENST00000490539 GPAMQ9HCL2 828 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 ZNF232Q9UNY5 417 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 KIAA1024Q9UPX6 916 aa7.11□□□□□ -1.27
CSTF1-205ENST00000490539 DENND4BO75064 1496 aaPredicted RBP7.11□□□□□ -1.27
CSTF1-205ENST00000490539 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L15C9J2P7 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L10C9JJH3 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L13C9JLJ4 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L12C9JPN9 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L11C9JVI0 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L21D6R901 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L18D6R9N7 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L22D6RA61 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L17D6RBQ6 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L19D6RCP7 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L20D6RJB6 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-205ENST00000490539 MSX1P28360 303 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 USP17L24Q0WX57 530 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 PTK7Q13308 1070 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 SLC9A9Q8IVB4 645 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 TNS4Q8IZW8 715 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 NEDD1Q8NHV4 660 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 FAM200AQ8TCP9 573 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 MBIPQ9NS73 344 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 MYO5CQ9NQX4 1742 aa7.1□□□□□ -1.27
CSTF1-205ENST00000490539 TTC37Q6PGP7 1564 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 SFI1A8K8P3 1242 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 RAPGEF3O95398 923 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 DPYDQ12882 1025 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 CRTC2Q53ET0 693 aaPredicted RBP7.09□□□□□ -1.27
CSTF1-205ENST00000490539 ARSJQ5FYB0 599 aaPredicted RBP7.09□□□□□ -1.27
CSTF1-205ENST00000490539 GAS2L2Q8NHY3 880 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 NEUROD4Q9HD90 331 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 CUEDC1Q9NWM3 386 aaPredicted RBP7.09□□□□□ -1.27
CSTF1-205ENST00000490539 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
CSTF1-205ENST00000490539 SCAPERQ9BY12 1400 aa7.09□□□□□ -1.28
CSTF1-205ENST00000490539 BCRP11274 1271 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
CSTF1-205ENST00000490539 TEAD4Q15561 434 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 DBN1Q16643 649 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 BICDL1Q6ZP65 573 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
CSTF1-205ENST00000490539 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
CSTF1-205ENST00000490539 NSFL1CQ9UNZ2 370 aaKnown RBP7.08□□□□□ -1.28
CSTF1-205ENST00000490539 IQSEC3Q9UPP2 1182 aaPredicted RBP7.08□□□□□ -1.28
CSTF1-205ENST00000490539 PLEKHH2Q8IVE3 1493 aa7.08□□□□□ -1.28
CSTF1-205ENST00000490539 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 ZNF518AQ6AHZ1 1483 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 NOS2P35228 1153 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 CDCA8Q53HL2 280 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 L3MBTL2Q969R5 705 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
CSTF1-205ENST00000490539 RUBCNLQ9H714 662 aa7.07□□□□□ -1.28
CSTF1-205ENST00000490539 PREX1Q8TCU6 1659 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 MAGI2Q86UL8 1455 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 PPP1R12BO60237 982 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-205ENST00000490539 EPHA4P54764 986 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 PBXIP1Q96AQ6 731 aa7.06□□□□□ -1.28
CSTF1-205ENST00000490539 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms