RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 ANP32CO43423 234 aa13.46□□□□□ -0.25
RBM39-236ENST00000490484 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
RBM39-236ENST00000490484 PPP1R42Q7Z4L9 355 aa13.46□□□□□ -0.25
RBM39-236ENST00000490484 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
RBM39-236ENST00000490484 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
RBM39-236ENST00000490484 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 GNAI1P63096 354 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 HSP90AB3PQ58FF7 597 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
RBM39-236ENST00000490484 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
RBM39-236ENST00000490484 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
RBM39-236ENST00000490484 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
RBM39-236ENST00000490484 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
RBM39-236ENST00000490484 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
RBM39-236ENST00000490484 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
RBM39-236ENST00000490484 LAMB2P55268 1798 aa13.44□□□□□ -0.26
RBM39-236ENST00000490484 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
RBM39-236ENST00000490484 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
RBM39-236ENST00000490484 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
RBM39-236ENST00000490484 NLRP10Q86W26 655 aa13.43□□□□□ -0.26
RBM39-236ENST00000490484 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
RBM39-236ENST00000490484 SNED1Q8TER0 1413 aa13.43□□□□□ -0.26
RBM39-236ENST00000490484 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
RBM39-236ENST00000490484 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
RBM39-236ENST00000490484 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
RBM39-236ENST00000490484 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
RBM39-236ENST00000490484 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
RBM39-236ENST00000490484 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
RBM39-236ENST00000490484 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
RBM39-236ENST00000490484 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
RBM39-236ENST00000490484 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
RBM39-236ENST00000490484 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 DDX60Q8IY21 1712 aaKnown RBP13.41□□□□□ -0.26
RBM39-236ENST00000490484 ABCC4O15439 1325 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 DDNO94850 711 aaPredicted RBP13.4□□□□□ -0.26
RBM39-236ENST00000490484 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
RBM39-236ENST00000490484 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
RBM39-236ENST00000490484 APLP1P51693 650 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 FSTL1Q12841 308 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 COL4A5P29400 1685 aa13.4□□□□□ -0.26
RBM39-236ENST00000490484 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 PSMD1Q99460 953 aa13.39□□□□□ -0.27
RBM39-236ENST00000490484 POTECB2RU33 542 aa13.38□□□□□ -0.27
RBM39-236ENST00000490484 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
RBM39-236ENST00000490484 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
RBM39-236ENST00000490484 TSPYL6Q8N831 410 aa13.38□□□□□ -0.27
RBM39-236ENST00000490484 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
RBM39-236ENST00000490484 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
RBM39-236ENST00000490484 HTRA3P83110 453 aa13.37□□□□□ -0.27
RBM39-236ENST00000490484 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
RBM39-236ENST00000490484 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
RBM39-236ENST00000490484 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
RBM39-236ENST00000490484 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
RBM39-236ENST00000490484 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 SCN4AP35499 1836 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 LRRC37AA6NMS7 1700 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 TAF1P21675 1872 aa13.36□□□□□ -0.27
RBM39-236ENST00000490484 COL4A1P02462 1669 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 L3MBTL3Q96JM7 780 aaPredicted RBP13.35□□□□□ -0.27
RBM39-236ENST00000490484 MYD88Q99836 296 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
RBM39-236ENST00000490484 FZD9O00144 591 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 GRAPQ13588 217 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
RBM39-236ENST00000490484 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
RBM39-236ENST00000490484 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 IL16Q14005 1332 aa13.34□□□□□ -0.27
RBM39-236ENST00000490484 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
RBM39-236ENST00000490484 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
RBM39-236ENST00000490484 DDX58O95786 925 aaKnown RBP13.33□□□□□ -0.28
RBM39-236ENST00000490484 AOC3Q16853 763 aa13.33□□□□□ -0.28
RBM39-236ENST00000490484 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
RBM39-236ENST00000490484 FAM9BQ8IZU0 186 aa13.33□□□□□ -0.28
RBM39-236ENST00000490484 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
RBM39-236ENST00000490484 TAF1DQ9H5J8 278 aaPredicted RBP13.33□□□□□ -0.28
RBM39-236ENST00000490484 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms