RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ATCAYQ86WG3 371 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 HPS1Q92902 700 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 TOR4AQ9NXH8 423 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 KLK14Q9P0G3 267 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 ZCCHC11Q5TAX3 1644 aaKnown RBP7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 SETBP1Q9Y6X0 1596 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 BRD2P25440 801 aaKnown RBP7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 PLA2G4AP47712 749 aa7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 AIDAQ96BJ3 306 aa7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 POLMQ9NP87 494 aaPredicted RBP7.83□□□□□ -1.16
SSX2IP-208ENST00000490476 ZNF335Q9H4Z2 1342 aaPredicted RBP7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 FHAD1B1AJZ9 1412 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 PHKA2P46019 1235 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 MEIOBQ8N635 442 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 ABTB2Q8N961 1025 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 RHBDD1Q8TEB9 315 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 MYO19Q96H55 970 aa7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 KIAA1522Q9P206 1035 aaPredicted RBP7.82□□□□□ -1.16
SSX2IP-208ENST00000490476 SIGLEC1Q9BZZ2 1709 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 FZD6O60353 706 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 TXLNAP40222 546 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 RTN1Q16799 776 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 C11orf91Q3C1V1 193 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 IFT43Q96FT9 208 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 TSEN34Q9BSV6 310 aaKnown RBP7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 RBCK1Q9BYM8 510 aa7.81□□□□□ -1.16
SSX2IP-208ENST00000490476 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 TOM1O60784 492 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 UPP2O95045 317 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 AVPP01185 164 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 P4HBP07237 508 aaKnown RBP7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 HIRAP54198 1017 aaPredicted RBP7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 C6orf118Q5T5N4 469 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 ZNF295-AS1Q8N0V1 137 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 FRMPD1Q5SYB0 1578 aa7.8□□□□□ -1.16
SSX2IP-208ENST00000490476 NCOA1Q15788 1441 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 POGZQ7Z3K3 1410 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 LRP5O75197 1615 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 BMP2P12643 396 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 MAPK8P45983 427 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 C4orf17Q53FE4 359 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 EDEM1Q92611 657 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 FANCAO15360 1455 aa7.79□□□□□ -1.16
SSX2IP-208ENST00000490476 ALKQ9UM73 1620 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 ZAP70P43403 619 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 RNF144AP50876 292 aaPredicted RBP7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 PRICKLE2Q7Z3G6 844 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 RHPN1Q8TCX5 695 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 CUX1P39880 1505 aa7.78□□□□□ -1.16
SSX2IP-208ENST00000490476 UHRF1BP1LA0JNW5 1464 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 GPC1P35052 558 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 POU4F2Q12837 409 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 NBPF1Q3BBV0 1214 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 TREML1Q86YW5 311 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 GPR152Q8TDT2 470 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 RAPGEF6Q8TEU7 1601 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 KDM5BQ9UGL1 1544 aa7.77□□□□□ -1.17
SSX2IP-208ENST00000490476 WDR7Q9Y4E6 1490 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 SENP3-EIF4A1A0A087X0R7 540 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 SPINT1O43278 529 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 TREHO43280 583 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 NIF3L1Q9GZT8 377 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 PTPRGP23470 1445 aa7.76□□□□□ -1.17
SSX2IP-208ENST00000490476 GPR182O15218 404 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 PDGFAP04085 211 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 TATP17735 454 aaPredicted RBP7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 MZF1P28698 734 aaPredicted RBP7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 EHHADHQ08426 723 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 C8orf34Q49A92 452 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 TTC16Q8NEE8 873 aa7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 ZNF775Q96BV0 537 aaPredicted RBP7.75□□□□□ -1.17
SSX2IP-208ENST00000490476 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms