RNA–Protein interactions for RNA: ENST00000490104.5

TSN-208, Transcript of translin, humanhuman

TSL 2

Gene TSN, Length 2,717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-208ENST00000490104 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 NLRP10Q86W26 655 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 MSH5O43196 834 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 HMMRO75330 724 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 EN1Q05925 392 aaPredicted RBP17.34■□□□□ 0.37
TSN-208ENST00000490104 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
TSN-208ENST00000490104 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
TSN-208ENST00000490104 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
TSN-208ENST00000490104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
TSN-208ENST00000490104 NUCB1Q02818 461 aa17.33■□□□□ 0.36
TSN-208ENST00000490104 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
TSN-208ENST00000490104 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
TSN-208ENST00000490104 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
TSN-208ENST00000490104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
TSN-208ENST00000490104 COL5A3P25940 1745 aaPredicted RBP17.32■□□□□ 0.36
TSN-208ENST00000490104 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
TSN-208ENST00000490104 N4BP2Q86UW6 1770 aaPredicted RBP17.31■□□□□ 0.36
TSN-208ENST00000490104 CASP7P55210 303 aa17.31■□□□□ 0.36
TSN-208ENST00000490104 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
TSN-208ENST00000490104 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
TSN-208ENST00000490104 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
TSN-208ENST00000490104 ZPR1O75312 459 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 RFC4P35249 363 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
TSN-208ENST00000490104 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
TSN-208ENST00000490104 NUP98P52948 1817 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 H7C1W4 665 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
TSN-208ENST00000490104 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
TSN-208ENST00000490104 UTYO14607 1347 aa17.29■□□□□ 0.36
TSN-208ENST00000490104 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
TSN-208ENST00000490104 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
TSN-208ENST00000490104 LY75O60449 1722 aa17.28■□□□□ 0.36
TSN-208ENST00000490104 FOXO4P98177 505 aa17.28■□□□□ 0.36
TSN-208ENST00000490104 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
TSN-208ENST00000490104 ERVV-1B6SEH8 477 aa17.27■□□□□ 0.36
TSN-208ENST00000490104 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
TSN-208ENST00000490104 POLA2Q14181 598 aa17.27■□□□□ 0.36
TSN-208ENST00000490104 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
TSN-208ENST00000490104 NPHP1O15259 732 aa17.27■□□□□ 0.36
TSN-208ENST00000490104 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
TSN-208ENST00000490104 TAF1LQ8IZX4 1826 aa17.27■□□□□ 0.36
TSN-208ENST00000490104 LRRCC1Q9C099 1032 aa17.27■□□□□ 0.35
TSN-208ENST00000490104 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
TSN-208ENST00000490104 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
TSN-208ENST00000490104 RC3H1Q5TC82 1133 aaKnown RBP17.25■□□□□ 0.35
TSN-208ENST00000490104 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
TSN-208ENST00000490104 GREM2Q9H772 168 aa17.25■□□□□ 0.35
TSN-208ENST00000490104 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
TSN-208ENST00000490104 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
TSN-208ENST00000490104 PUS3Q9BZE2 481 aaKnown RBP17.25■□□□□ 0.35
TSN-208ENST00000490104 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
TSN-208ENST00000490104 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
TSN-208ENST00000490104 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
TSN-208ENST00000490104 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
TSN-208ENST00000490104 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
TSN-208ENST00000490104 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
TSN-208ENST00000490104 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
TSN-208ENST00000490104 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
TSN-208ENST00000490104 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
TSN-208ENST00000490104 LRRC24Q50LG9 513 aa17.24■□□□□ 0.35
TSN-208ENST00000490104 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
TSN-208ENST00000490104 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
TSN-208ENST00000490104 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
TSN-208ENST00000490104 MTX1Q13505 466 aa17.23■□□□□ 0.35
TSN-208ENST00000490104 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
TSN-208ENST00000490104 USP42Q9H9J4 1324 aaKnown RBP17.23■□□□□ 0.35
TSN-208ENST00000490104 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.358e-6■■□□□ 11.5
TSN-208ENST00000490104 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 PLSCR1O15162 318 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 SASH1O94885 1247 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 NTSR2O95665 410 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
TSN-208ENST00000490104 PLEKHM2Q8IWE5 1019 aa17.22■□□□□ 0.35
TSN-208ENST00000490104 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
TSN-208ENST00000490104 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
TSN-208ENST00000490104 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
TSN-208ENST00000490104 RABL6Q3YEC7 729 aaPredicted RBP17.21■□□□□ 0.35
TSN-208ENST00000490104 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
TSN-208ENST00000490104 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
TSN-208ENST00000490104 RREB1Q92766 1687 aa17.21■□□□□ 0.35
TSN-208ENST00000490104 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
TSN-208ENST00000490104 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
TSN-208ENST00000490104 ITGA6P23229 1130 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 CTSWP56202 376 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 TFCP2Q12800 502 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 NFIXQ14938 502 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
TSN-208ENST00000490104 COL23A1Q86Y22 540 aaPredicted RBP17.2■□□□□ 0.34
TSN-208ENST00000490104 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 GYS1P13807 737 aa17.2■□□□□ 0.34
TSN-208ENST00000490104 ANKRD36CQ5JPF3 1778 aa17.19■□□□□ 0.34
TSN-208ENST00000490104 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms