RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 SMC3Q9UQE7 1217 aa15.95■□□□□ 0.14
TNXB-206ENST00000490077 PLEKHO1Q53GL0 409 aaPredicted RBP15.95■□□□□ 0.14
TNXB-206ENST00000490077 RIC3Q7Z5B4 369 aa15.95■□□□□ 0.14
TNXB-206ENST00000490077 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
TNXB-206ENST00000490077 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
TNXB-206ENST00000490077 F13A1P00488 732 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 LIG1P18858 919 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 CHST3Q7LGC8 479 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 INTS4Q96HW7 963 aaKnown RBP15.94■□□□□ 0.14
TNXB-206ENST00000490077 OFD1O75665 1012 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 CEBPZQ03701 1054 aaKnown RBP15.94■□□□□ 0.14
TNXB-206ENST00000490077 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
TNXB-206ENST00000490077 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
TNXB-206ENST00000490077 TFCP2Q12800 502 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 ERCC4Q92889 916 aaPredicted RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 DNAJC2Q99543 621 aaKnown RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 NFAT5O94916 1531 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 SLC27A2O14975 620 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 GLRX3O76003 335 aaKnown RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
TNXB-206ENST00000490077 DBNLQ9UJU6 430 aaKnown RBP15.93■□□□□ 0.14
TNXB-206ENST00000490077 ZNF594Q96JF6 807 aaPredicted RBP15.92■□□□□ 0.14
TNXB-206ENST00000490077 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 CCDC171Q6TFL3 1326 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 WDR33Q9C0J8 1336 aaKnown RBP15.92■□□□□ 0.14
TNXB-206ENST00000490077 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
TNXB-206ENST00000490077 KRT28Q7Z3Y7 464 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 DBNDD2Q9BQY9 259 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 ADCY5O95622 1261 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 PTMAP06454 111 aaKnown RBP15.92■□□□□ 0.14
TNXB-206ENST00000490077 ZNF790Q6PG37 636 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 RAB11FIP4Q86YS3 637 aa15.92■□□□□ 0.14
TNXB-206ENST00000490077 GPHNQ9NQX3 736 aaPredicted RBP15.92■□□□□ 0.14
TNXB-206ENST00000490077 TOB2Q14106 344 aaPredicted RBP15.91■□□□□ 0.14
TNXB-206ENST00000490077 NEURL1BA8MQ27 555 aa15.91■□□□□ 0.14
TNXB-206ENST00000490077 PTMSP20962 102 aa15.91■□□□□ 0.14
TNXB-206ENST00000490077 ZSWIM6Q9HCJ5 1215 aa15.91■□□□□ 0.14
TNXB-206ENST00000490077 CYP27B1O15528 508 aa15.9■□□□□ 0.14
TNXB-206ENST00000490077 MCM2P49736 904 aa15.9■□□□□ 0.14
TNXB-206ENST00000490077 TIMM10P62072 90 aa15.9■□□□□ 0.14
TNXB-206ENST00000490077 G3BP1Q13283 466 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNXB-206ENST00000490077 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
TNXB-206ENST00000490077 KDM4AO75164 1064 aa15.89■□□□□ 0.13
TNXB-206ENST00000490077 GCKRQ14397 625 aa15.89■□□□□ 0.13
TNXB-206ENST00000490077 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
TNXB-206ENST00000490077 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
TNXB-206ENST00000490077 CYP46A1Q9Y6A2 500 aa15.89■□□□□ 0.13
TNXB-206ENST00000490077 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 NKX2-3Q8TAU0 364 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 UBE2Q2Q8WVN8 375 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 MAP4K1Q92918 833 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 MBD3O95983 291 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 MTX1Q13505 466 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 LARP1BQ659C4 914 aaKnown RBP15.88■□□□□ 0.13
TNXB-206ENST00000490077 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
TNXB-206ENST00000490077 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
TNXB-206ENST00000490077 UQCRHLA0A096LP55 91 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 UQCRHP07919 91 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 GUCY1B3Q02153 619 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
TNXB-206ENST00000490077 LUZP1Q86V48 1076 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 NCOA5Q9HCD5 579 aaKnown RBP15.87■□□□□ 0.13
TNXB-206ENST00000490077 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.13
TNXB-206ENST00000490077 GJB4Q9NTQ9 266 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 KDM6AO15550 1401 aaPredicted RBP15.87■□□□□ 0.13
TNXB-206ENST00000490077 RGPD5Q99666 1765 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 IL17RAQ96F46 866 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 PYCARDQ9ULZ3 195 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 AOX1Q06278 1338 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 A1BGP04217 495 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 TTLL5Q6EMB2 1281 aa15.87■□□□□ 0.13
TNXB-206ENST00000490077 PROSER2Q86WR7 435 aaPredicted RBP15.87■□□□□ 0.13
TNXB-206ENST00000490077 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
TNXB-206ENST00000490077 ERBB3P21860 1342 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 KCNF1Q9H3M0 494 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 SNRKQ9NRH2 765 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 TAF5LO75529 589 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
TNXB-206ENST00000490077 LRRC24Q50LG9 513 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 FUCA2Q9BTY2 467 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 DENND2AQ9ULE3 1009 aa15.86■□□□□ 0.13
TNXB-206ENST00000490077 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
TNXB-206ENST00000490077 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
TNXB-206ENST00000490077 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms