RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 ELOA3Q8NG57 546 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 MYO19Q96H55 970 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 QTRT2Q9H974 415 aaKnown RBP8.07□□□□□ -1.12
HMGN1-218ENST00000490032 DMGDHQ9UI17 866 aaKnown RBP8.07□□□□□ -1.12
HMGN1-218ENST00000490032 FAM69CQ0P6D2 419 aa8.06□□□□□ -1.12
HMGN1-218ENST00000490032 TNFRSF25Q93038 417 aa8.06□□□□□ -1.12
HMGN1-218ENST00000490032 SERPINA10Q9UK55 444 aa8.06□□□□□ -1.12
HMGN1-218ENST00000490032 PIK3R2O00459 728 aa8.05□□□□□ -1.12
HMGN1-218ENST00000490032 ALYREFQ86V81 257 aaKnown RBP8.05□□□□□ -1.12
HMGN1-218ENST00000490032 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
HMGN1-218ENST00000490032 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-218ENST00000490032 GNB5O14775 395 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 COL8A1P27658 744 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 NEUROD1Q13562 356 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 OCLNQ16625 522 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 PBXIP1Q96AQ6 731 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
HMGN1-218ENST00000490032 IGHA1P01876 353 aa8.03□□□□□ -1.12
HMGN1-218ENST00000490032 FKBP5Q13451 457 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-218ENST00000490032 VTI1AQ96AJ9 217 aa8.03□□□□□ -1.12
HMGN1-218ENST00000490032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGN1-218ENST00000490032 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
HMGN1-218ENST00000490032 ITGB2P05107 769 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 ALAS2P22557 587 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
HMGN1-218ENST00000490032 DGKZQ13574 1117 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 C11orf91Q3C1V1 193 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 RAB44Q7Z6P3 723 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-218ENST00000490032 PRIMPOLQ96LW4 560 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
HMGN1-218ENST00000490032 ARID3CA6NKF2 412 aa8.01□□□□□ -1.13
HMGN1-218ENST00000490032 INPP5BP32019 993 aa8.01□□□□□ -1.13
HMGN1-218ENST00000490032 TMEM164Q5U3C3 297 aa8.01□□□□□ -1.13
HMGN1-218ENST00000490032 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
HMGN1-218ENST00000490032 LRFN2Q9ULH4 789 aa8.01□□□□□ -1.13
HMGN1-218ENST00000490032 PRMT3O60678 531 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 ADH7P40394 386 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 IDH3AP50213 366 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 GPAT2Q6NUI2 795 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 BHMTQ93088 406 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 COL26A1Q96A83 441 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
HMGN1-218ENST00000490032 STARD13Q9Y3M8 1113 aa8□□□□□ -1.13
HMGN1-218ENST00000490032 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 MICAL2O94851 1124 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 EPB42P16452 691 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 ARSDP51689 593 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 CCINQ13939 588 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 CLP1Q92989 425 aaKnown RBP7.99□□□□□ -1.13
HMGN1-218ENST00000490032 TRIM11Q96F44 468 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
HMGN1-218ENST00000490032 CXXC1Q9P0U4 656 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-218ENST00000490032 COX20Q5RI15 118 aa7.98□□□□□ -1.13
HMGN1-218ENST00000490032 COL9A3Q14050 684 aaPredicted RBP7.97□□□□□ -1.13
HMGN1-218ENST00000490032 IFT43Q96FT9 208 aa7.97□□□□□ -1.13
HMGN1-218ENST00000490032 M0R082 166 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 OPLAHO14841 1288 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 ALBP02768 609 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 C20orf204Q6ZNR8 217 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 MICALL1Q8N3F8 863 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 CCDC82Q8N4S0 544 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 ZNF417Q8TAU3 575 aa7.96□□□□□ -1.14
HMGN1-218ENST00000490032 ZNF587Q96SQ5 575 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-218ENST00000490032 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-218ENST00000490032 MSTNO14793 375 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 MAP3K6O95382 1288 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 PROCP04070 461 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 C16orf46Q6P387 395 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 PNMA5Q96PV4 448 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 SPOCK3Q9BQ16 436 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 SAP130Q9H0E3 1048 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 SLC6A14Q9UN76 642 aa7.95□□□□□ -1.14
HMGN1-218ENST00000490032 PTCD1O75127 700 aaKnown RBP7.94□□□□□ -1.14
HMGN1-218ENST00000490032 EGFRP00533 1210 aa7.94□□□□□ -1.14
HMGN1-218ENST00000490032 NFKB1P19838 968 aa7.94□□□□□ -1.14
HMGN1-218ENST00000490032 TREML1Q86YW5 311 aa7.94□□□□□ -1.14
HMGN1-218ENST00000490032 UBE2OQ9C0C9 1292 aaKnown RBP7.94□□□□□ -1.14
HMGN1-218ENST00000490032 DNAJB12Q9NXW2 375 aaKnown RBP7.94□□□□□ -1.14
HMGN1-218ENST00000490032 CAPN12Q6ZSI9 719 aa7.93□□□□□ -1.14
HMGN1-218ENST00000490032 ZFATQ9P243 1243 aa7.93□□□□□ -1.14
HMGN1-218ENST00000490032 RTCBQ9Y3I0 505 aaKnown RBP7.93□□□□□ -1.14
HMGN1-218ENST00000490032 TNFRSF10BO14763 440 aa7.92□□□□□ -1.14
HMGN1-218ENST00000490032 PPP1R15AO75807 674 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-218ENST00000490032 NID1P14543 1247 aa7.92□□□□□ -1.14
HMGN1-218ENST00000490032 BRD2P25440 801 aaKnown RBP7.92□□□□□ -1.14
HMGN1-218ENST00000490032 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
HMGN1-218ENST00000490032 C14orf37Q86TY3 774 aa7.92□□□□□ -1.14
HMGN1-218ENST00000490032 ETFBKMTQ8IXQ9 262 aa7.92□□□□□ -1.14
HMGN1-218ENST00000490032 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
HMGN1-218ENST00000490032 SPATA31C1P0DKV0 1188 aa7.91□□□□□ -1.14
HMGN1-218ENST00000490032 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
HMGN1-218ENST00000490032 TBC1D8BQ0IIM8 1120 aa7.91□□□□□ -1.14
HMGN1-218ENST00000490032 FAM26DQ5JW98 314 aa7.91□□□□□ -1.14
HMGN1-218ENST00000490032 MKNK1Q9BUB5 465 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms