RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
GTF3C5-210ENST00000489842 SMC1BQ8NDV3 1235 aa11.95□□□□□ -0.5
GTF3C5-210ENST00000489842 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
GTF3C5-210ENST00000489842 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
GTF3C5-210ENST00000489842 CHL1O00533 1208 aa11.94□□□□□ -0.5
GTF3C5-210ENST00000489842 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
GTF3C5-210ENST00000489842 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
GTF3C5-210ENST00000489842 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
GTF3C5-210ENST00000489842 ELL2O00472 640 aaPredicted RBP11.93□□□□□ -0.5
GTF3C5-210ENST00000489842 APAF1O14727 1248 aa11.93□□□□□ -0.5
GTF3C5-210ENST00000489842 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
GTF3C5-210ENST00000489842 KLRG1Q96E93 195 aa11.93□□□□□ -0.5
GTF3C5-210ENST00000489842 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
GTF3C5-210ENST00000489842 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 ALDH1B1P30837 517 aa11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
GTF3C5-210ENST00000489842 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 RGL2O15211 777 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 LMOD3Q0VAK6 560 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 SOGA3Q5TF21 947 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 UTP14AQ9BVJ6 771 aaKnown RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 DDX21Q9NR30 783 aaKnown RBP eCLIP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 PCNTO95613 3336 aa11.91□□□□□ -0.5
GTF3C5-210ENST00000489842 ABCC4O15439 1325 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 FMR1Q06787 632 aaKnown RBP eCLIP11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 RTKN2Q8IZC4 609 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 IBTKQ9P2D0 1353 aaPredicted RBP11.9□□□□□ -0.5
GTF3C5-210ENST00000489842 FZD9O00144 591 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 NLRP3Q96P20 1036 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 TRMT112Q9UI30 125 aaKnown RBP11.89□□□□□ -0.51
GTF3C5-210ENST00000489842 SCN4AP35499 1836 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 ZNF853P0CG23 659 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 AOC3Q16853 763 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
GTF3C5-210ENST00000489842 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 EPHX2P34913 555 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 LARGE2Q8N3Y3 721 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 PSMD1Q99460 953 aa11.87□□□□□ -0.51
GTF3C5-210ENST00000489842 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 EPS15P42566 896 aa11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
GTF3C5-210ENST00000489842 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 SCNN1DP51172 638 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 LDHDQ86WU2 507 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 JDP2Q8WYK2 163 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 SH3TC1Q8TE82 1336 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
GTF3C5-210ENST00000489842 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
GTF3C5-210ENST00000489842 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
GTF3C5-210ENST00000489842 EIF6P56537 245 aaKnown RBP11.84□□□□□ -0.51
GTF3C5-210ENST00000489842 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
GTF3C5-210ENST00000489842 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
GTF3C5-210ENST00000489842 IQCA1LA6NCM1 817 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 RAD17O75943 681 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 CXCL9Q07325 125 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms