RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 APAF1O14727 1248 aa14.47□□□□□ -0.09
GABBR1-217ENST00000489839 VEGFAP15692 232 aaPredicted RBP14.47□□□□□ -0.09
GABBR1-217ENST00000489839 CCDC93Q567U6 631 aa14.47□□□□□ -0.09
GABBR1-217ENST00000489839 NYXQ9GZU5 481 aa14.47□□□□□ -0.09
GABBR1-217ENST00000489839 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
GABBR1-217ENST00000489839 ZNF853P0CG23 659 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
GABBR1-217ENST00000489839 FSTL1Q12841 308 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 SOGA3Q5TF21 947 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 RIC1Q4ADV7 1423 aa14.46□□□□□ -0.09
GABBR1-217ENST00000489839 ZNF541Q9H0D2 1346 aa14.45□□□□□ -0.1
GABBR1-217ENST00000489839 ALDH1B1P30837 517 aa14.45□□□□□ -0.1
GABBR1-217ENST00000489839 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
GABBR1-217ENST00000489839 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
GABBR1-217ENST00000489839 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
GABBR1-217ENST00000489839 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
GABBR1-217ENST00000489839 NLRP10Q86W26 655 aa14.44□□□□□ -0.1
GABBR1-217ENST00000489839 SMC1BQ8NDV3 1235 aa14.44□□□□□ -0.1
GABBR1-217ENST00000489839 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
GABBR1-217ENST00000489839 HCLS1P14317 486 aaPredicted RBP14.43□□□□□ -0.1
GABBR1-217ENST00000489839 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
GABBR1-217ENST00000489839 SLC10A5Q5PT55 438 aa14.43□□□□□ -0.1
GABBR1-217ENST00000489839 HDGFL1Q5TGJ6 251 aa14.43□□□□□ -0.1
GABBR1-217ENST00000489839 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
GABBR1-217ENST00000489839 PPP1R42Q7Z4L9 355 aa14.43□□□□□ -0.1
GABBR1-217ENST00000489839 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
GABBR1-217ENST00000489839 DDX60Q8IY21 1712 aaKnown RBP14.42□□□□□ -0.1
GABBR1-217ENST00000489839 IARSP41252 1262 aaKnown RBP14.42□□□□□ -0.1
GABBR1-217ENST00000489839 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
GABBR1-217ENST00000489839 RTKN2Q8IZC4 609 aa14.42□□□□□ -0.1
GABBR1-217ENST00000489839 RPGRQ92834 1020 aaKnown RBP14.42□□□□□ -0.1
GABBR1-217ENST00000489839 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
GABBR1-217ENST00000489839 COL4A1P02462 1669 aa14.42□□□□□ -0.1
GABBR1-217ENST00000489839 SCN4AP35499 1836 aa14.41□□□□□ -0.1
GABBR1-217ENST00000489839 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
GABBR1-217ENST00000489839 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
GABBR1-217ENST00000489839 ABCC4O15439 1325 aa14.41□□□□□ -0.1
GABBR1-217ENST00000489839 FZD9O00144 591 aa14.4□□□□□ -0.1
GABBR1-217ENST00000489839 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
GABBR1-217ENST00000489839 HOXB7P09629 217 aa14.4□□□□□ -0.1
GABBR1-217ENST00000489839 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
GABBR1-217ENST00000489839 L3MBTL3Q96JM7 780 aaPredicted RBP14.4□□□□□ -0.1
GABBR1-217ENST00000489839 NLRP3Q96P20 1036 aa14.4□□□□□ -0.1
GABBR1-217ENST00000489839 PSMD1Q99460 953 aa14.4□□□□□ -0.1
GABBR1-217ENST00000489839 LTBP1Q14766 1721 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 ATP5J2-PTCD1G3V325 749 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 PLBD2Q8NHP8 589 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 KLRG1Q96E93 195 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
GABBR1-217ENST00000489839 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
GABBR1-217ENST00000489839 DBF4Q9UBU7 674 aaPredicted RBP14.39□□□□□ -0.11
GABBR1-217ENST00000489839 TRMT112Q9UI30 125 aaKnown RBP14.39□□□□□ -0.11
GABBR1-217ENST00000489839 HSP90AB3PQ58FF7 597 aa14.38□□□□□ -0.11
GABBR1-217ENST00000489839 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
GABBR1-217ENST00000489839 TSPYL6Q8N831 410 aa14.38□□□□□ -0.11
GABBR1-217ENST00000489839 TAF1DQ9H5J8 278 aaPredicted RBP14.38□□□□□ -0.11
GABBR1-217ENST00000489839 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 GNAI1P63096 354 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 SH3TC1Q8TE82 1336 aa14.37□□□□□ -0.11
GABBR1-217ENST00000489839 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
GABBR1-217ENST00000489839 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
GABBR1-217ENST00000489839 HYPKQ9NX55 129 aa14.36□□□□□ -0.11
GABBR1-217ENST00000489839 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
GABBR1-217ENST00000489839 AOC3Q16853 763 aa14.35□□□□□ -0.11
GABBR1-217ENST00000489839 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
GABBR1-217ENST00000489839 JMYQ8N9B5 988 aa14.35□□□□□ -0.11
GABBR1-217ENST00000489839 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
GABBR1-217ENST00000489839 DUOX1Q9NRD9 1551 aa14.34□□□□□ -0.11
GABBR1-217ENST00000489839 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
GABBR1-217ENST00000489839 EAPPQ56P03 285 aaPredicted RBP14.34□□□□□ -0.11
GABBR1-217ENST00000489839 JDP2Q8WYK2 163 aa14.34□□□□□ -0.11
GABBR1-217ENST00000489839 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
GABBR1-217ENST00000489839 LRRC37AA6NMS7 1700 aa14.34□□□□□ -0.11
GABBR1-217ENST00000489839 IQCA1LA6NCM1 817 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 ITGBL1O95965 494 aaPredicted RBP14.33□□□□□ -0.12
GABBR1-217ENST00000489839 EPHX2P34913 555 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 GRAPQ13588 217 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 SP8Q8IXZ3 490 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 GPC2Q8N158 579 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 GRAPLQ8TC17 118 aaPredicted RBP14.33□□□□□ -0.12
GABBR1-217ENST00000489839 JARID2Q92833 1246 aaPredicted RBP14.33□□□□□ -0.12
GABBR1-217ENST00000489839 CELF1Q92879 486 aaKnown RBP14.33□□□□□ -0.12
GABBR1-217ENST00000489839 RTFDC1Q9BY42 306 aaPredicted RBP14.33□□□□□ -0.12
GABBR1-217ENST00000489839 GJA3Q9Y6H8 435 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 PASKQ96RG2 1323 aa14.33□□□□□ -0.12
GABBR1-217ENST00000489839 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
GABBR1-217ENST00000489839 BBOX1O75936 387 aa14.32□□□□□ -0.12
GABBR1-217ENST00000489839 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
GABBR1-217ENST00000489839 EPS15P42566 896 aa14.32□□□□□ -0.12
GABBR1-217ENST00000489839 SCNN1DP51172 638 aa14.32□□□□□ -0.12
GABBR1-217ENST00000489839 TRIM28Q13263 835 aaKnown RBP14.32□□□□□ -0.12
GABBR1-217ENST00000489839 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms