RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
MVB12B-206ENST00000489637 DDB1Q16531 1140 aa18.46■□□□□ 0.55
MVB12B-206ENST00000489637 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
MVB12B-206ENST00000489637 GZF1Q9H116 711 aaPredicted RBP18.46■□□□□ 0.55
MVB12B-206ENST00000489637 GLI3P10071 1580 aa18.46■□□□□ 0.55
MVB12B-206ENST00000489637 PARP4Q9UKK3 1724 aaKnown RBP18.46■□□□□ 0.55
MVB12B-206ENST00000489637 PKP1Q13835 747 aa18.46■□□□□ 0.54
MVB12B-206ENST00000489637 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.54
MVB12B-206ENST00000489637 SHANK3Q9BYB0 1731 aa18.45■□□□□ 0.54
MVB12B-206ENST00000489637 PTH1RQ03431 593 aa18.45■□□□□ 0.54
MVB12B-206ENST00000489637 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
MVB12B-206ENST00000489637 TOGARAM1Q9Y4F4 1720 aa18.45■□□□□ 0.54
MVB12B-206ENST00000489637 H7C1W4 665 aa18.45■□□□□ 0.54
MVB12B-206ENST00000489637 COL9A3Q14050 684 aaPredicted RBP18.45■□□□□ 0.54
MVB12B-206ENST00000489637 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
MVB12B-206ENST00000489637 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
MVB12B-206ENST00000489637 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
MVB12B-206ENST00000489637 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
MVB12B-206ENST00000489637 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
MVB12B-206ENST00000489637 RABEP1Q15276 862 aa18.43■□□□□ 0.54
MVB12B-206ENST00000489637 RASEFQ8IZ41 740 aa18.43■□□□□ 0.54
MVB12B-206ENST00000489637 DIAPH3Q9NSV4 1193 aa18.43■□□□□ 0.54
MVB12B-206ENST00000489637 ABCC6O95255 1503 aa18.43■□□□□ 0.54
MVB12B-206ENST00000489637 GOLGB1Q14789 3259 aaKnown RBP18.43■□□□□ 0.54
MVB12B-206ENST00000489637 SPATA31A1Q5TZJ5 1347 aa18.42■□□□□ 0.54
MVB12B-206ENST00000489637 STARD3NLO95772 234 aa18.42■□□□□ 0.54
MVB12B-206ENST00000489637 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
MVB12B-206ENST00000489637 SSFA2P28290 1259 aa18.42■□□□□ 0.54
MVB12B-206ENST00000489637 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
MVB12B-206ENST00000489637 ERC1Q8IUD2 1116 aa18.42■□□□□ 0.54
MVB12B-206ENST00000489637 SGSM2O43147 1006 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 TOM1O60784 492 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 TNNI3KQ59H18 835 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 HDAC5Q9UQL6 1122 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 FPGT-TNNI3KV9GXZ4 949 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 TCIRG1Q13488 830 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
MVB12B-206ENST00000489637 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 MCM4P33991 863 aa18.4■□□□□ 0.54
MVB12B-206ENST00000489637 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 DDX46Q7L014 1031 aaKnown RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 SEC62Q99442 399 aaKnown RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
MVB12B-206ENST00000489637 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
MVB12B-206ENST00000489637 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
MVB12B-206ENST00000489637 COPRSQ9NQ92 184 aa18.4■□□□□ 0.54
MVB12B-206ENST00000489637 CIZ1Q9ULV3 898 aaPredicted RBP18.4■□□□□ 0.54
MVB12B-206ENST00000489637 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.54
MVB12B-206ENST00000489637 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.54
MVB12B-206ENST00000489637 ATG9AQ7Z3C6 839 aa18.39■□□□□ 0.54
MVB12B-206ENST00000489637 ARFGEF2Q9Y6D5 1785 aa18.39■□□□□ 0.53
MVB12B-206ENST00000489637 A0A0D9SFI3 127 aa18.39■□□□□ 0.53
MVB12B-206ENST00000489637 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
MVB12B-206ENST00000489637 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.53
MVB12B-206ENST00000489637 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 BCL9O00512 1426 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
MVB12B-206ENST00000489637 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 GPATCH3Q96I76 525 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
MVB12B-206ENST00000489637 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 TNS2Q63HR2 1409 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
MVB12B-206ENST00000489637 ITPK1Q13572 414 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 AOX1Q06278 1338 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 SNAP23O00161 211 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
MVB12B-206ENST00000489637 ZNF589Q86UQ0 364 aaPredicted RBP18.37■□□□□ 0.53
MVB12B-206ENST00000489637 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
MVB12B-206ENST00000489637 ST18O60284 1047 aa18.36■□□□□ 0.53
MVB12B-206ENST00000489637 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
MVB12B-206ENST00000489637 SNX14Q9Y5W7 946 aa18.36■□□□□ 0.53
MVB12B-206ENST00000489637 ADORA1P30542 326 aa18.36■□□□□ 0.53
MVB12B-206ENST00000489637 HELBQ8NG08 1087 aaPredicted RBP18.36■□□□□ 0.53
MVB12B-206ENST00000489637 TRMT112Q9UI30 125 aaKnown RBP18.36■□□□□ 0.53
MVB12B-206ENST00000489637 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
MVB12B-206ENST00000489637 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 EVI5LQ96CN4 794 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 ITGB4P16144 1822 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 MCCP23508 829 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 KCNJ4P48050 445 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
MVB12B-206ENST00000489637 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
MVB12B-206ENST00000489637 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 PI16Q6UXB8 463 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
MVB12B-206ENST00000489637 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 GREM2Q9H772 168 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms