RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 CC2D2BQ6DHV5 1058 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 CYP2U1Q7Z449 544 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 POLMQ9NP87 494 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-207ENST00000488934 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 PHLPP1O60346 1717 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 KIAA1210Q9ULL0 1709 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 CDC42BPGQ6DT37 1551 aa7.37□□□□□ -1.23
SF3A3-207ENST00000488934 LRPPRCP42704 1394 aaKnown RBP7.37□□□□□ -1.23
SF3A3-207ENST00000488934 DHX57Q6P158 1386 aaKnown RBP7.37□□□□□ -1.23
SF3A3-207ENST00000488934 LILRA1O75019 489 aa7.37□□□□□ -1.23
SF3A3-207ENST00000488934 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-207ENST00000488934 SLAIN2Q9P270 581 aa7.37□□□□□ -1.23
SF3A3-207ENST00000488934 CEP126Q9P2H0 1117 aa7.37□□□□□ -1.23
SF3A3-207ENST00000488934 ABCC11Q96J66 1382 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 HSPA1LP34931 641 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 PTGIRP43119 386 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 SEMA3FQ13275 785 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 IRF5Q13568 498 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 AGBL1Q96MI9 1066 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 ASXL1Q8IXJ9 1541 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 DLC1Q96QB1 1528 aa7.36□□□□□ -1.23
SF3A3-207ENST00000488934 YTHDC2Q9H6S0 1430 aaKnown RBP7.35□□□□□ -1.23
SF3A3-207ENST00000488934 ROBO2Q9HCK4 1378 aa7.35□□□□□ -1.23
SF3A3-207ENST00000488934 AHDC1Q5TGY3 1603 aaPredicted RBP7.35□□□□□ -1.23
SF3A3-207ENST00000488934 NFX1Q12986 1120 aaKnown RBP7.35□□□□□ -1.23
SF3A3-207ENST00000488934 IRF7Q92985 503 aa7.35□□□□□ -1.23
SF3A3-207ENST00000488934 SIRT1Q96EB6 747 aa7.35□□□□□ -1.23
SF3A3-207ENST00000488934 C14orf93Q9H972 538 aaKnown RBP7.35□□□□□ -1.23
SF3A3-207ENST00000488934 MST1RQ04912 1400 aa7.35□□□□□ -1.23
SF3A3-207ENST00000488934 RNF135Q8IUD6 432 aa7.34□□□□□ -1.23
SF3A3-207ENST00000488934 INSM2Q96T92 566 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-207ENST00000488934 ZNF395Q9H8N7 513 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-207ENST00000488934 DNMT3LQ9UJW3 386 aa7.34□□□□□ -1.23
SF3A3-207ENST00000488934 DOLKQ9UPQ8 538 aa7.34□□□□□ -1.23
SF3A3-207ENST00000488934 NHSL1Q5SYE7 1610 aa7.34□□□□□ -1.24
SF3A3-207ENST00000488934 ADGRB1O14514 1584 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 MED1Q15648 1581 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-207ENST00000488934 KIF1AQ12756 1690 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 FIGNL2A6NMB9 653 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 SOBPA7XYQ1 873 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 H3BM21 787 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 ADD1P35611 737 aaKnown RBP7.33□□□□□ -1.24
SF3A3-207ENST00000488934 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 COL16A1Q07092 1604 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-207ENST00000488934 ADGRB2O60241 1585 aa7.33□□□□□ -1.24
SF3A3-207ENST00000488934 EIF3AQ14152 1382 aaKnown RBP7.33□□□□□ -1.24
SF3A3-207ENST00000488934 ARHGEF28Q8N1W1 1705 aaKnown RBP7.32□□□□□ -1.24
SF3A3-207ENST00000488934 FMN2Q9NZ56 1722 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 SHPRHQ149N8 1683 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 C1orf167Q5SNV9 1468 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 GPC1P35052 558 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 CTSOP43234 321 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-207ENST00000488934 USP4Q13107 963 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 STK26Q9P289 416 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 JCADQ9P266 1359 aa7.32□□□□□ -1.24
SF3A3-207ENST00000488934 MEN1O00255 615 aa7.31□□□□□ -1.24
SF3A3-207ENST00000488934 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
SF3A3-207ENST00000488934 TMEM132EQ6IEE7 984 aa7.31□□□□□ -1.24
SF3A3-207ENST00000488934 BRINP3Q76B58 766 aa7.31□□□□□ -1.24
SF3A3-207ENST00000488934 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
SF3A3-207ENST00000488934 SPATA31A6Q5VVP1 1343 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 ITSN1Q15811 1721 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 GNRH1P01148 92 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 RNF144AP50876 292 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-207ENST00000488934 INSM1Q01101 510 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-207ENST00000488934 PTSQ03393 145 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 LYSMD3Q7Z3D4 306 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 POGKQ9P215 609 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 TONSLQ96HA7 1378 aa7.3□□□□□ -1.24
SF3A3-207ENST00000488934 ANKARQ7Z5J8 1434 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 A0A1W2PRU2 124 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 GTF2E1P29083 439 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-207ENST00000488934 SCTRP47872 440 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 SLC27A3Q5K4L6 730 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-207ENST00000488934 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 CCDC85AQ96PX6 553 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-207ENST00000488934 PRAM1Q96QH2 718 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 OSBPL3Q9H4L5 887 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 TRPM1Q7Z4N2 1603 aa7.29□□□□□ -1.24
SF3A3-207ENST00000488934 NPHP3Q7Z494 1330 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 WIPF1O43516 503 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 TRAK2O60296 914 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 PPFIA3O75145 1194 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 VEGFBP49765 207 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 CLN3Q13286 438 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 OXLD1Q5BKU9 147 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 KDF1Q8NAX2 398 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-207ENST00000488934 LRRC59Q96AG4 307 aaKnown RBP7.28□□□□□ -1.24
SF3A3-207ENST00000488934 TRAK1Q9UPV9 953 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 PLEKHH1Q9ULM0 1364 aa7.28□□□□□ -1.24
SF3A3-207ENST00000488934 RGPD8O14715 1765 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-207ENST00000488934 CLSPNQ9HAW4 1339 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms