RNA–Protein interactions for RNA: ENST00000488716.1

NME9-209, Transcript of NME/NM23 family member 9, humanhuman

TSL 3

Gene NME9, Length 688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-209ENST00000488716 MSH6P52701 1360 aa10.64□□□□□ -0.71
NME9-209ENST00000488716 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
NME9-209ENST00000488716 ZNF335Q9H4Z2 1342 aaPredicted RBP10.63□□□□□ -0.71
NME9-209ENST00000488716 ATG7O95352 703 aa10.63□□□□□ -0.71
NME9-209ENST00000488716 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
NME9-209ENST00000488716 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
NME9-209ENST00000488716 PNPLA6Q8IY17 1366 aa10.63□□□□□ -0.71
NME9-209ENST00000488716 BLMP54132 1417 aaPredicted RBP10.62□□□□□ -0.71
NME9-209ENST00000488716 MAGEB6P1A0A0J9YX57 407 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 SH3BP5LQ7L8J4 393 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 BAP1Q92560 729 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 OCSTAMPQ9BR26 566 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 GGNBP2Q9H3C7 697 aa10.62□□□□□ -0.71
NME9-209ENST00000488716 FCF1Q9Y324 198 aaKnown RBP10.62□□□□□ -0.71
NME9-209ENST00000488716 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
NME9-209ENST00000488716 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
NME9-209ENST00000488716 PIK3C2AO00443 1686 aa10.61□□□□□ -0.71
NME9-209ENST00000488716 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
NME9-209ENST00000488716 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
NME9-209ENST00000488716 LTBP4Q8N2S1 1624 aa10.61□□□□□ -0.71
NME9-209ENST00000488716 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
NME9-209ENST00000488716 ATF3P18847 181 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
NME9-209ENST00000488716 NME9Q86XW9 330 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.6□□□□□ -0.71
NME9-209ENST00000488716 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 FAM174AQ8TBP5 190 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
NME9-209ENST00000488716 CDK12Q9NYV4 1490 aaPredicted RBP10.6□□□□□ -0.71
NME9-209ENST00000488716 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
NME9-209ENST00000488716 COG3Q96JB2 828 aa10.59□□□□□ -0.71
NME9-209ENST00000488716 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
NME9-209ENST00000488716 SHPRHQ149N8 1683 aa10.59□□□□□ -0.71
NME9-209ENST00000488716 TRPM3Q9HCF6 1732 aaPredicted RBP10.58□□□□□ -0.72
NME9-209ENST00000488716 IQSEC2Q5JU85 1478 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 KIF24Q5T7B8 1368 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 MTHFSP49914 203 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.72
NME9-209ENST00000488716 SBNO1A3KN83 1393 aa10.57□□□□□ -0.72
NME9-209ENST00000488716 PATL2C9JE40 543 aaKnown RBP10.57□□□□□ -0.72
NME9-209ENST00000488716 ZBTB24O43167 697 aaPredicted RBP10.57□□□□□ -0.72
NME9-209ENST00000488716 LZTS3O60299 673 aaPredicted RBP10.57□□□□□ -0.72
NME9-209ENST00000488716 KCNC4Q03721 635 aa10.57□□□□□ -0.72
NME9-209ENST00000488716 ZNF511Q8NB15 262 aa10.57□□□□□ -0.72
NME9-209ENST00000488716 CFAP53Q96M91 514 aa10.57□□□□□ -0.72
NME9-209ENST00000488716 ORAI2Q96SN7 254 aa10.57□□□□□ -0.72
NME9-209ENST00000488716 MKRN1Q9UHC7 482 aaKnown RBP10.57□□□□□ -0.72
NME9-209ENST00000488716 MARF1Q9Y4F3 1742 aaKnown RBP10.57□□□□□ -0.72
NME9-209ENST00000488716 PXDNQ92626 1479 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 BRD1O95696 1058 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 NCOA4Q13772 614 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 MAP7D1Q3KQU3 841 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 LARP1Q6PKG0 1096 aaKnown RBP10.56□□□□□ -0.72
NME9-209ENST00000488716 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 PHTF2Q8N3S3 785 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 FOXJ1Q92949 421 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 POLKQ9UBT6 870 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
NME9-209ENST00000488716 SLIT3O75094 1523 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 NPHP3Q7Z494 1330 aa10.56□□□□□ -0.72
NME9-209ENST00000488716 ALS2Q96Q42 1657 aa10.55□□□□□ -0.72
NME9-209ENST00000488716 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
NME9-209ENST00000488716 HNRNPUQ00839 825 aaKnown RBP eCLIP10.55□□□□□ -0.72
NME9-209ENST00000488716 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
NME9-209ENST00000488716 EML3Q32P44 896 aa10.55□□□□□ -0.72
NME9-209ENST00000488716 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
NME9-209ENST00000488716 HCSTQ9UBK5 93 aa10.55□□□□□ -0.72
NME9-209ENST00000488716 USP19O94966 1318 aa10.55□□□□□ -0.72
NME9-209ENST00000488716 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
NME9-209ENST00000488716 NFAT5O94916 1531 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 GGCXP38435 758 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
NME9-209ENST00000488716 PSME1Q06323 249 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 ELOAQ14241 798 aaKnown RBP10.54□□□□□ -0.72
NME9-209ENST00000488716 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
NME9-209ENST00000488716 ERFEQ4G0M1 354 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 NOVA2Q9UNW9 492 aaKnown RBP10.54□□□□□ -0.72
NME9-209ENST00000488716 ADAMTS8Q9UP79 889 aa10.54□□□□□ -0.72
NME9-209ENST00000488716 RTL1A6NKG5 1358 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 FOXO3O43524 673 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 RASA1P20936 1047 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 RNF20Q5VTR2 975 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 DOLKQ9UPQ8 538 aa10.53□□□□□ -0.72
NME9-209ENST00000488716 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
NME9-209ENST00000488716 KCNA1Q09470 495 aa10.52□□□□□ -0.73
NME9-209ENST00000488716 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
NME9-209ENST00000488716 FLT4P35916 1363 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms