RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SLC51AQ86UW1 340 aa21.9■■□□□ 1.1
SHROOM1-205ENST00000488072 C2CD5Q86YS7 1000 aa21.9■■□□□ 1.1
SHROOM1-205ENST00000488072 FAM89AQ96GI7 184 aa21.9■■□□□ 1.1
SHROOM1-205ENST00000488072 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
SHROOM1-205ENST00000488072 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
SHROOM1-205ENST00000488072 N4BP2Q86UW6 1770 aaPredicted RBP21.89■■□□□ 1.1
SHROOM1-205ENST00000488072 YBX3P16989 372 aaKnown RBP eCLIP21.89■■□□□ 1.09
SHROOM1-205ENST00000488072 GTF2E1P29083 439 aaPredicted RBP21.89■■□□□ 1.09
SHROOM1-205ENST00000488072 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
SHROOM1-205ENST00000488072 PARP10Q53GL7 1025 aa21.89■■□□□ 1.09
SHROOM1-205ENST00000488072 ANKRD31Q8N7Z5 1873 aa21.89■■□□□ 1.09
SHROOM1-205ENST00000488072 ST5P78524 1137 aa21.88■■□□□ 1.09
SHROOM1-205ENST00000488072 BRIP1Q9BX63 1249 aa21.88■■□□□ 1.09
SHROOM1-205ENST00000488072 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
SHROOM1-205ENST00000488072 NEURL1BA8MQ27 555 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 CT47B1P0C2W7 299 aaPredicted RBP21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 TGFB2P61812 414 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 PPP1R42Q7Z4L9 355 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 KIF13BQ9NQT8 1826 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
SHROOM1-205ENST00000488072 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
SHROOM1-205ENST00000488072 BEND3Q5T5X7 828 aa21.86■■□□□ 1.09
SHROOM1-205ENST00000488072 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
SHROOM1-205ENST00000488072 CWC25Q9NXE8 425 aaPredicted RBP21.85■■□□□ 1.09
SHROOM1-205ENST00000488072 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHROOM1-205ENST00000488072 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
SHROOM1-205ENST00000488072 COL11A2P13942 1736 aaPredicted RBP21.83■■□□□ 1.09
SHROOM1-205ENST00000488072 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
SHROOM1-205ENST00000488072 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
SHROOM1-205ENST00000488072 FRAT1Q92837 279 aaPredicted RBP21.83■■□□□ 1.09
SHROOM1-205ENST00000488072 BCS1LQ9Y276 419 aa21.83■■□□□ 1.09
SHROOM1-205ENST00000488072 IBTKQ9P2D0 1353 aaPredicted RBP21.83■■□□□ 1.08
SHROOM1-205ENST00000488072 H0YIN7 160 aa21.82■■□□□ 1.08
SHROOM1-205ENST00000488072 PDE6BP35913 854 aa21.82■■□□□ 1.08
SHROOM1-205ENST00000488072 GCKRQ14397 625 aa21.82■■□□□ 1.08
SHROOM1-205ENST00000488072 GPR162Q16538 588 aa21.82■■□□□ 1.08
SHROOM1-205ENST00000488072 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
SHROOM1-205ENST00000488072 KLRG2A4D1S0 409 aaPredicted RBP21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 IRS4O14654 1257 aaPredicted RBP21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 SRGNP10124 158 aa21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 NEXNQ0ZGT2 675 aa21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 OLFM4Q6UX06 510 aa21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 LINS1Q8NG48 757 aa21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 CCDC85AQ96PX6 553 aaPredicted RBP21.81■■□□□ 1.08
SHROOM1-205ENST00000488072 ZBTB38Q8NAP3 1195 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-205ENST00000488072 PIM2Q9P1W9 311 aa21.8■■□□□ 1.08
SHROOM1-205ENST00000488072 PTPRCP08575 1304 aa21.8■■□□□ 1.08
SHROOM1-205ENST00000488072 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
SHROOM1-205ENST00000488072 BRPF1P55201 1214 aaPredicted RBP21.79■■□□□ 1.08
SHROOM1-205ENST00000488072 CASP7P55210 303 aa21.79■■□□□ 1.08
SHROOM1-205ENST00000488072 UBE3BQ7Z3V4 1068 aa21.79■■□□□ 1.08
SHROOM1-205ENST00000488072 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
SHROOM1-205ENST00000488072 H7C1W4 665 aa21.78■■□□□ 1.08
SHROOM1-205ENST00000488072 COL4A1P02462 1669 aa21.78■■□□□ 1.08
SHROOM1-205ENST00000488072 TRIM27P14373 513 aa21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 CRY2Q49AN0 593 aa21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 DALRD3Q5D0E6 543 aaKnown RBP21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 MASTLQ96GX5 879 aa21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 NLRP3Q96P20 1036 aa21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 SRCIN1Q9C0H9 1055 aa21.77■■□□□ 1.08
SHROOM1-205ENST00000488072 CACNA1FO60840 1977 aa21.76■■□□□ 1.07
SHROOM1-205ENST00000488072 PLIN1O60240 522 aa21.76■■□□□ 1.07
SHROOM1-205ENST00000488072 EPHA10Q5JZY3 1008 aa21.76■■□□□ 1.07
SHROOM1-205ENST00000488072 DDX60Q8IY21 1712 aaKnown RBP21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 NPR1P16066 1061 aa21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 STYK1Q6J9G0 422 aa21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 TTLL6Q8N841 843 aa21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 SEC31BQ9NQW1 1179 aa21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 RCAN3Q9UKA8 241 aa21.75■■□□□ 1.07
SHROOM1-205ENST00000488072 RIC1Q4ADV7 1423 aa21.74■■□□□ 1.07
SHROOM1-205ENST00000488072 NBPF7P0C2Y1 421 aaPredicted RBP21.74■■□□□ 1.07
SHROOM1-205ENST00000488072 RLBP1P12271 317 aa21.74■■□□□ 1.07
SHROOM1-205ENST00000488072 PRPF40BQ6NWY9 871 aaKnown RBP21.74■■□□□ 1.07
SHROOM1-205ENST00000488072 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
SHROOM1-205ENST00000488072 C21orf2O43822 256 aa21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 RPGRQ92834 1020 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 ABCC4O15439 1325 aa21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 RNF123Q5XPI4 1314 aa21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 KIF16BQ96L93 1317 aa21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-205ENST00000488072 GRM8O00222 908 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 ALDH1L1O75891 902 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 HOXA10P31260 410 aaPredicted RBP21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 ATF7IPQ6VMQ6 1270 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 KAZALD1Q96I82 304 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 SUCLG2Q96I99 432 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 CDHR2Q9BYE9 1310 aa21.72■■□□□ 1.07
SHROOM1-205ENST00000488072 LAMB2P55268 1798 aa21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 SLX4Q8IY92 1834 aa21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 SF3B3Q15393 1217 aaKnown RBP21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 ZKSCAN2Q63HK3 967 aa21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 C7orf43Q8WVR3 580 aa21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 CELF1Q92879 486 aaKnown RBP21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 USP44Q9H0E7 712 aa21.71■■□□□ 1.07
SHROOM1-205ENST00000488072 DLEC1Q9Y238 1755 aa21.7■■□□□ 1.06
SHROOM1-205ENST00000488072 PDE8AO60658 829 aa21.7■■□□□ 1.06
SHROOM1-205ENST00000488072 PRELPP51888 382 aa21.7■■□□□ 1.06
SHROOM1-205ENST00000488072 FOXO4P98177 505 aa21.7■■□□□ 1.06
SHROOM1-205ENST00000488072 ARHGAP27Q6ZUM4 889 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms