RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GPC6Q9Y625 555 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-217ENST00000487825 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
BRCA1-217ENST00000487825 SFSWAPQ12872 951 aaKnown RBP8.92□□□□□ -0.98
BRCA1-217ENST00000487825 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 BEND7Q8N7W2 519 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-217ENST00000487825 FAM200AQ8TCP9 573 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 SUSD3Q96L08 255 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 KLF15Q9UIH9 416 aa8.92□□□□□ -0.98
BRCA1-217ENST00000487825 AQRO60306 1485 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRCA1-217ENST00000487825 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
BRCA1-217ENST00000487825 ANKIB1Q9P2G1 1089 aa8.91□□□□□ -0.98
BRCA1-217ENST00000487825 EPXP11678 715 aa8.9□□□□□ -0.98
BRCA1-217ENST00000487825 ADH6P28332 368 aa8.9□□□□□ -0.98
BRCA1-217ENST00000487825 LAMC2Q13753 1193 aa8.9□□□□□ -0.98
BRCA1-217ENST00000487825 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
BRCA1-217ENST00000487825 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.99
BRCA1-217ENST00000487825 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-217ENST00000487825 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 IGFBP4P22692 258 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 ZNF468Q5VIY5 522 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-217ENST00000487825 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 ABCC8Q09428 1581 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
BRCA1-217ENST00000487825 FCHSD1Q86WN1 690 aa8.88□□□□□ -0.99
BRCA1-217ENST00000487825 BTBD6Q96KE9 485 aa8.88□□□□□ -0.99
BRCA1-217ENST00000487825 BRD7Q9NPI1 651 aa8.88□□□□□ -0.99
BRCA1-217ENST00000487825 ERCC6L2Q5T890 1561 aa8.87□□□□□ -0.99
BRCA1-217ENST00000487825 WEE1P30291 646 aa8.87□□□□□ -0.99
BRCA1-217ENST00000487825 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
BRCA1-217ENST00000487825 SLC30A3Q99726 388 aa8.87□□□□□ -0.99
BRCA1-217ENST00000487825 AVENQ9NQS1 362 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-217ENST00000487825 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
BRCA1-217ENST00000487825 TYRO3Q06418 890 aa8.86□□□□□ -0.99
BRCA1-217ENST00000487825 RTN1Q16799 776 aa8.86□□□□□ -0.99
BRCA1-217ENST00000487825 RAB44Q7Z6P3 723 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-217ENST00000487825 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-217ENST00000487825 MKL2Q9ULH7 1088 aa8.86□□□□□ -0.99
BRCA1-217ENST00000487825 SNAPC4Q5SXM2 1469 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 VTI1AQ96AJ9 217 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 ZMIZ1Q9ULJ6 1067 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 KCNH4Q9UQ05 1017 aa8.85□□□□□ -0.99
BRCA1-217ENST00000487825 TOP2AP11388 1531 aaKnown RBP8.85□□□□□ -0.99
BRCA1-217ENST00000487825 PRMT3O60678 531 aa8.84□□□□□ -0.99
BRCA1-217ENST00000487825 HOXB4P17483 251 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-217ENST00000487825 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
BRCA1-217ENST00000487825 HIF1AQ16665 826 aa8.84□□□□□ -0.99
BRCA1-217ENST00000487825 CHSY3Q70JA7 882 aa8.84□□□□□ -0.99
BRCA1-217ENST00000487825 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
BRCA1-217ENST00000487825 KLK14Q9P0G3 267 aa8.84□□□□□ -0.99
BRCA1-217ENST00000487825 DCAF5Q96JK2 942 aa8.83□□□□□ -1
BRCA1-217ENST00000487825 BCS1LQ9Y276 419 aa8.83□□□□□ -1
BRCA1-217ENST00000487825 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
BRCA1-217ENST00000487825 HECW2Q9P2P5 1572 aa8.82□□□□□ -1
BRCA1-217ENST00000487825 FOXO3O43524 673 aa8.82□□□□□ -1
BRCA1-217ENST00000487825 DGKZQ13574 1117 aa8.82□□□□□ -1
BRCA1-217ENST00000487825 LINC00114Q6XXX2 140 aa8.82□□□□□ -1
BRCA1-217ENST00000487825 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
BRCA1-217ENST00000487825 SERPINA10Q9UK55 444 aa8.82□□□□□ -1
BRCA1-217ENST00000487825 POLA1P09884 1462 aaPredicted RBP8.82□□□□□ -1
BRCA1-217ENST00000487825 ACIN1Q9UKV3 1341 aaKnown RBP8.81□□□□□ -1
BRCA1-217ENST00000487825 TGFBR3LH3BV60 316 aa8.81□□□□□ -1
BRCA1-217ENST00000487825 SIN3BO75182 1162 aa8.81□□□□□ -1
BRCA1-217ENST00000487825 KCNQ4P56696 695 aa8.81□□□□□ -1
BRCA1-217ENST00000487825 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
BRCA1-217ENST00000487825 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
BRCA1-217ENST00000487825 BHMTQ93088 406 aa8.81□□□□□ -1
BRCA1-217ENST00000487825 KDM6BO15054 1643 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 ELOA3CA0A087WX78 387 aaPredicted RBP8.8□□□□□ -1
BRCA1-217ENST00000487825 ELOA3DA6NLF2 546 aaPredicted RBP8.8□□□□□ -1
BRCA1-217ENST00000487825 ATG7O95352 703 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 ALAS2P22557 587 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 DGKGP49619 791 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
BRCA1-217ENST00000487825 NEUROD1Q13562 356 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 ELOA3BQ3SY89 546 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 ELOA3Q8NG57 546 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 SUV39H2Q9H5I1 410 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 PBRM1Q86U86 1689 aa8.8□□□□□ -1
BRCA1-217ENST00000487825 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
BRCA1-217ENST00000487825 IER5Q5VY09 327 aa8.79□□□□□ -1
BRCA1-217ENST00000487825 DMGDHQ9UI17 866 aaKnown RBP8.79□□□□□ -1
BRCA1-217ENST00000487825 SYNJ2O15056 1496 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 GNB5O14775 395 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 COL8A1P27658 744 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 IDH3AP50213 366 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 C11orf91Q3C1V1 193 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 IGFLR1Q9H665 355 aa8.78□□□□□ -1
BRCA1-217ENST00000487825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -14e-6■■■■■ 85.3
BRCA1-217ENST00000487825 ADARB2-AS1A8MUL3 147 aa8.77□□□□□ -1.01
BRCA1-217ENST00000487825 OCLNQ16625 522 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms