RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
CCDC66-221ENST00000487739 BTLAQ7Z6A9 289 aa8.68□□□□□ -1.02
CCDC66-221ENST00000487739 LGR5O75473 907 aa8.67□□□□□ -1.02
CCDC66-221ENST00000487739 IER5Q5VY09 327 aa8.67□□□□□ -1.02
CCDC66-221ENST00000487739 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
CCDC66-221ENST00000487739 ARXQ96QS3 562 aa8.67□□□□□ -1.02
CCDC66-221ENST00000487739 TGFBR3LH3BV60 316 aa8.65□□□□□ -1.02
CCDC66-221ENST00000487739 ADH7P40394 386 aa8.65□□□□□ -1.02
CCDC66-221ENST00000487739 TRIM11Q96F44 468 aa8.65□□□□□ -1.02
CCDC66-221ENST00000487739 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
CCDC66-221ENST00000487739 FOXO3O43524 673 aa8.64□□□□□ -1.03
CCDC66-221ENST00000487739 FAM200AQ8TCP9 573 aa8.64□□□□□ -1.03
CCDC66-221ENST00000487739 BHMTQ93088 406 aa8.64□□□□□ -1.03
CCDC66-221ENST00000487739 PLVAPQ9BX97 442 aa8.64□□□□□ -1.03
CCDC66-221ENST00000487739 M0R082 166 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 RFX1P22670 979 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 WEE1P30291 646 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 ZNF417Q8TAU3 575 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 VTI1AQ96AJ9 217 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 ZNF587Q96SQ5 575 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-221ENST00000487739 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
CCDC66-221ENST00000487739 EPB42P16452 691 aa8.62□□□□□ -1.03
CCDC66-221ENST00000487739 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
CCDC66-221ENST00000487739 C1QTNF9BB2RNN3 333 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 ALBP02768 609 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 SPATA31C1P0DKV0 1188 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 BAG6P46379 1132 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 CDCA8Q53HL2 280 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 PNMA5Q96PV4 448 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
CCDC66-221ENST00000487739 NOVA2Q9UNW9 492 aaKnown RBP8.61□□□□□ -1.03
CCDC66-221ENST00000487739 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
CCDC66-221ENST00000487739 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 DGKZQ13574 1117 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 CD163Q86VB7 1156 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
CCDC66-221ENST00000487739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC66-221ENST00000487739 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
CCDC66-221ENST00000487739 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
CCDC66-221ENST00000487739 ADAM23O75077 832 aa8.59□□□□□ -1.03
CCDC66-221ENST00000487739 CHRNA4P43681 627 aa8.59□□□□□ -1.03
CCDC66-221ENST00000487739 GSX2Q9BZM3 304 aa8.59□□□□□ -1.03
CCDC66-221ENST00000487739 IDH3AP50213 366 aa8.58□□□□□ -1.04
CCDC66-221ENST00000487739 CCINQ13939 588 aa8.58□□□□□ -1.04
CCDC66-221ENST00000487739 MYO19Q96H55 970 aa8.58□□□□□ -1.04
CCDC66-221ENST00000487739 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
CCDC66-221ENST00000487739 INPP5BP32019 993 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 ARSDP51689 593 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 IGFLR1Q9H665 355 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
CCDC66-221ENST00000487739 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
CCDC66-221ENST00000487739 K7ELQ4 463 aaPredicted RBP8.56□□□□□ -1.04
CCDC66-221ENST00000487739 LILRB5O75023 590 aa8.56□□□□□ -1.04
CCDC66-221ENST00000487739 NFKB1P19838 968 aa8.56□□□□□ -1.04
CCDC66-221ENST00000487739 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
CCDC66-221ENST00000487739 ELOAQ14241 798 aaKnown RBP8.56□□□□□ -1.04
CCDC66-221ENST00000487739 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
CCDC66-221ENST00000487739 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
CCDC66-221ENST00000487739 NID1P14543 1247 aa8.55□□□□□ -1.04
CCDC66-221ENST00000487739 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
CCDC66-221ENST00000487739 MICAL2O94851 1124 aa8.54□□□□□ -1.04
CCDC66-221ENST00000487739 APBA3O96018 575 aa8.54□□□□□ -1.04
CCDC66-221ENST00000487739 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
CCDC66-221ENST00000487739 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
CCDC66-221ENST00000487739 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
CCDC66-221ENST00000487739 C11orf16Q9NQ32 467 aa8.54□□□□□ -1.04
CCDC66-221ENST00000487739 ZMIZ1Q9ULJ6 1067 aa8.54□□□□□ -1.04
CCDC66-221ENST00000487739 PCSK7Q16549 785 aa8.53□□□□□ -1.04
CCDC66-221ENST00000487739 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
CCDC66-221ENST00000487739 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
CCDC66-221ENST00000487739 JPH1Q9HDC5 661 aaPredicted RBP8.53□□□□□ -1.04
CCDC66-221ENST00000487739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
CCDC66-221ENST00000487739 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 PRMT3O60678 531 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 FURINP09958 794 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 GATA4P43694 442 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 NACC1Q96RE7 527 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.05
CCDC66-221ENST00000487739 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
CCDC66-221ENST00000487739 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
CCDC66-221ENST00000487739 KRT25Q7Z3Z0 450 aa8.51□□□□□ -1.05
CCDC66-221ENST00000487739 NUDT8Q8WV74 236 aa8.51□□□□□ -1.05
CCDC66-221ENST00000487739 NAGPAQ9UK23 515 aa8.51□□□□□ -1.05
CCDC66-221ENST00000487739 ATG7O95352 703 aa8.5□□□□□ -1.05
CCDC66-221ENST00000487739 RARAP10276 462 aa8.5□□□□□ -1.05
CCDC66-221ENST00000487739 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
CCDC66-221ENST00000487739 OCLNQ16625 522 aa8.5□□□□□ -1.05
CCDC66-221ENST00000487739 DHX32Q7L7V1 743 aaKnown RBP8.5□□□□□ -1.05
CCDC66-221ENST00000487739 RGS9O75916 674 aaPredicted RBP8.49□□□□□ -1.05
CCDC66-221ENST00000487739 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
CCDC66-221ENST00000487739 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
CCDC66-221ENST00000487739 COX20Q5RI15 118 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms