RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 CPA1P15085 419 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SGSM2O43147 1006 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 TUBB4BP68371 445 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MLECQ14165 292 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 NEK11Q8NG66 645 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 LEO1Q8WVC0 666 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MRFAP1L1Q96HT8 127 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CARD6Q9BX69 1037 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 IQCEQ6IPM2 695 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 LIG1P18858 919 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MTMR6Q9Y217 621 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 AOX1Q06278 1338 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 NME9Q86XW9 330 aa17.7■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CACTINQ8WUQ7 758 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 FBLN1P23142 703 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 SMC1AQ14683 1233 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 C8orf76Q96K31 380 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CEP112Q8N8E3 955 aa17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MICALL1Q8N3F8 863 aa17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 HNRNPH2P55795 449 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 HDXQ7Z353 690 aa17.68■□□□□ 0.42
HLA-DQB1-209ENST00000487676 EFCC1Q9HA90 598 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 FBXO38Q6PIJ6 1188 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 PPM1EQ8WY54 764 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TUBBP07437 444 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 FAM135BQ49AJ0 1406 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TTC6Q86TZ1 520 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 LARP1Q6PKG0 1096 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CDC25BP30305 580 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ERVK-7P63135 1459 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ATP8B1O43520 1251 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 FAM160A1Q05DH4 1040 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TAF7Q15545 349 aaPredicted RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 PAXIP1Q6ZW49 1069 aaPredicted RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ZNHIT6Q9NWK9 470 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
HLA-DQB1-209ENST00000487676 KCNG4Q8TDN1 519 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MPHOSPH8Q99549 860 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 PLXNC1O60486 1568 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CTAGE15A4D2H0 777 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CTAGE8P0CG41 777 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CTAGE6Q86UF2 777 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CTAGE4Q8IX94 777 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CCDC47Q96A33 483 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 RTL1A6NKG5 1358 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 SLFNL1Q499Z3 407 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 MICALCLQ6ZW33 695 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 GOLGA5Q8TBA6 731 aa17.65■□□□□ 0.42
HLA-DQB1-209ENST00000487676 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NAP1L1P55209 391 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 EBAG9O00559 213 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CDKL5O76039 1030 aa17.64■□□□□ 0.41
HLA-DQB1-209ENST00000487676 DRC1Q96MC2 740 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms