RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ABCC12Q96J65 1359 aa24.94■■□□□ 1.58
SEC22A-208ENST00000487572 RARSP54136 660 aaKnown RBP24.94■■□□□ 1.58
SEC22A-208ENST00000487572 NEXNQ0ZGT2 675 aa24.94■■□□□ 1.58
SEC22A-208ENST00000487572 DNAAF4Q8WXU2 420 aa24.94■■□□□ 1.58
SEC22A-208ENST00000487572 N4BP2Q86UW6 1770 aaPredicted RBP24.94■■□□□ 1.58
SEC22A-208ENST00000487572 KIAA1551Q9HCM1 1747 aa24.93■■□□□ 1.58
SEC22A-208ENST00000487572 PDE6BP35913 854 aa24.93■■□□□ 1.58
SEC22A-208ENST00000487572 C2CD5Q86YS7 1000 aa24.93■■□□□ 1.58
SEC22A-208ENST00000487572 ANKRD31Q8N7Z5 1873 aa24.92■■□□□ 1.58
SEC22A-208ENST00000487572 IGKV5-2P06315 115 aa24.91■■□□□ 1.58
SEC22A-208ENST00000487572 TRIM28Q13263 835 aaKnown RBP24.91■■□□□ 1.58
SEC22A-208ENST00000487572 CWF19L2Q2TBE0 894 aaKnown RBP24.91■■□□□ 1.58
SEC22A-208ENST00000487572 RTL5Q5HYW3 569 aaPredicted RBP24.91■■□□□ 1.58
SEC22A-208ENST00000487572 CWC25Q9NXE8 425 aaPredicted RBP24.91■■□□□ 1.58
SEC22A-208ENST00000487572 H0YIN7 160 aa24.9■■□□□ 1.58
SEC22A-208ENST00000487572 SYNE4Q8N205 404 aa24.9■■□□□ 1.58
SEC22A-208ENST00000487572 CCDC191Q8NCU4 936 aa24.9■■□□□ 1.58
SEC22A-208ENST00000487572 PTPRCP08575 1304 aa24.89■■□□□ 1.58
SEC22A-208ENST00000487572 SH3TC1Q8TE82 1336 aa24.89■■□□□ 1.58
SEC22A-208ENST00000487572 GPR162Q16538 588 aa24.89■■□□□ 1.58
SEC22A-208ENST00000487572 SLC4A10Q6U841 1118 aa24.89■■□□□ 1.58
SEC22A-208ENST00000487572 FAM89AQ96GI7 184 aa24.89■■□□□ 1.58
SEC22A-208ENST00000487572 RNF123Q5XPI4 1314 aa24.88■■□□□ 1.57
SEC22A-208ENST00000487572 TNRC6CQ9HCJ0 1690 aaKnown RBP24.88■■□□□ 1.57
SEC22A-208ENST00000487572 NEURL1BA8MQ27 555 aa24.88■■□□□ 1.57
SEC22A-208ENST00000487572 KCNA3P22001 575 aa24.88■■□□□ 1.57
SEC22A-208ENST00000487572 NOB1Q9ULX3 412 aaKnown RBP24.88■■□□□ 1.57
SEC22A-208ENST00000487572 DCAF8L1A6NGE4 600 aa24.87■■□□□ 1.57
SEC22A-208ENST00000487572 BCAR3O75815 825 aa24.87■■□□□ 1.57
SEC22A-208ENST00000487572 HCLS1P14317 486 aaPredicted RBP24.87■■□□□ 1.57
SEC22A-208ENST00000487572 JARID2Q92833 1246 aaPredicted RBP24.87■■□□□ 1.57
SEC22A-208ENST00000487572 ZNF622Q969S3 477 aaKnown RBP eCLIP24.87■■□□□ 1.57
SEC22A-208ENST00000487572 PIM2Q9P1W9 311 aa24.87■■□□□ 1.57
SEC22A-208ENST00000487572 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
SEC22A-208ENST00000487572 LINS1Q8NG48 757 aa24.86■■□□□ 1.57
SEC22A-208ENST00000487572 BCS1LQ9Y276 419 aa24.86■■□□□ 1.57
SEC22A-208ENST00000487572 BEND3Q5T5X7 828 aa24.85■■□□□ 1.57
SEC22A-208ENST00000487572 C3orf67Q6ZVT6 689 aa24.85■■□□□ 1.57
SEC22A-208ENST00000487572 ZBTB38Q8NAP3 1195 aaPredicted RBP24.85■■□□□ 1.57
SEC22A-208ENST00000487572 PDZRN3Q9UPQ7 1066 aa24.85■■□□□ 1.57
SEC22A-208ENST00000487572 KIF16BQ96L93 1317 aa24.85■■□□□ 1.57
SEC22A-208ENST00000487572 YBX3P16989 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
SEC22A-208ENST00000487572 BRPF1P55201 1214 aaPredicted RBP24.84■■□□□ 1.57
SEC22A-208ENST00000487572 SLC10A5Q5PT55 438 aa24.84■■□□□ 1.57
SEC22A-208ENST00000487572 RIC1Q4ADV7 1423 aa24.84■■□□□ 1.57
SEC22A-208ENST00000487572 IRS4O14654 1257 aaPredicted RBP24.83■■□□□ 1.57
SEC22A-208ENST00000487572 PCCAP05165 728 aaPredicted RBP24.83■■□□□ 1.57
SEC22A-208ENST00000487572 SRGNP10124 158 aa24.83■■□□□ 1.57
SEC22A-208ENST00000487572 GCKRQ14397 625 aa24.83■■□□□ 1.57
SEC22A-208ENST00000487572 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
SEC22A-208ENST00000487572 FRAT1Q92837 279 aaPredicted RBP24.83■■□□□ 1.57
SEC22A-208ENST00000487572 NLRP3Q96P20 1036 aa24.83■■□□□ 1.57
SEC22A-208ENST00000487572 KLRG2A4D1S0 409 aaPredicted RBP24.82■■□□□ 1.56
SEC22A-208ENST00000487572 RPGRQ92834 1020 aaKnown RBP24.82■■□□□ 1.56
SEC22A-208ENST00000487572 MASTLQ96GX5 879 aa24.82■■□□□ 1.56
SEC22A-208ENST00000487572 SRCIN1Q9C0H9 1055 aa24.82■■□□□ 1.56
SEC22A-208ENST00000487572 DLEC1Q9Y238 1755 aa24.82■■□□□ 1.56
SEC22A-208ENST00000487572 NPR1P16066 1061 aa24.81■■□□□ 1.56
SEC22A-208ENST00000487572 STYK1Q6J9G0 422 aa24.81■■□□□ 1.56
SEC22A-208ENST00000487572 API5Q9BZZ5 524 aaKnown RBP24.81■■□□□ 1.56
SEC22A-208ENST00000487572 CRY2Q49AN0 593 aa24.8■■□□□ 1.56
SEC22A-208ENST00000487572 UBE3BQ7Z3V4 1068 aa24.8■■□□□ 1.56
SEC22A-208ENST00000487572 TTLL6Q8N841 843 aa24.8■■□□□ 1.56
SEC22A-208ENST00000487572 BRCA1P38398 1863 aaKnown RBP24.79■■□□□ 1.56
SEC22A-208ENST00000487572 DDX60Q8IY21 1712 aaKnown RBP24.79■■□□□ 1.56
SEC22A-208ENST00000487572 IPO8O15397 1037 aaKnown RBP24.78■■□□□ 1.56
SEC22A-208ENST00000487572 ALDH1L1O75891 902 aa24.78■■□□□ 1.56
SEC22A-208ENST00000487572 CNKSR1Q969H4 720 aa24.78■■□□□ 1.56
SEC22A-208ENST00000487572 ZNF219Q9P2Y4 722 aaPredicted RBP24.78■■□□□ 1.56
SEC22A-208ENST00000487572 H7C1W4 665 aa24.77■■□□□ 1.56
SEC22A-208ENST00000487572 CDHR2Q9BYE9 1310 aa24.77■■□□□ 1.56
SEC22A-208ENST00000487572 HSP90B1P14625 803 aaKnown RBP24.76■■□□□ 1.55
SEC22A-208ENST00000487572 PRPF40BQ6NWY9 871 aaKnown RBP24.76■■□□□ 1.55
SEC22A-208ENST00000487572 ARHGAP45Q92619 1136 aa24.76■■□□□ 1.55
SEC22A-208ENST00000487572 RBM17Q96I25 401 aaKnown RBP24.76■■□□□ 1.55
SEC22A-208ENST00000487572 C9orf78Q9NZ63 289 aaPredicted RBP24.76■■□□□ 1.55
SEC22A-208ENST00000487572 RCAN3Q9UKA8 241 aa24.76■■□□□ 1.55
SEC22A-208ENST00000487572 LAMB2P55268 1798 aa24.75■■□□□ 1.55
SEC22A-208ENST00000487572 TNNQ9UQP3 1299 aa24.75■■□□□ 1.55
SEC22A-208ENST00000487572 GRM8O00222 908 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 GRIN3BO60391 1043 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 PDE8AO60658 829 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 TRIM27P14373 513 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 ALDH1B1P30837 517 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 ZKSCAN2Q63HK3 967 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 ATF7IPQ6VMQ6 1270 aa24.74■■□□□ 1.55
SEC22A-208ENST00000487572 HOXA10P31260 410 aaPredicted RBP24.73■■□□□ 1.55
SEC22A-208ENST00000487572 CCT4P50991 539 aaKnown RBP24.73■■□□□ 1.55
SEC22A-208ENST00000487572 CASP7P55210 303 aa24.73■■□□□ 1.55
SEC22A-208ENST00000487572 CLUAP1Q96AJ1 413 aa24.73■■□□□ 1.55
SEC22A-208ENST00000487572 CCDC85AQ96PX6 553 aaPredicted RBP24.73■■□□□ 1.55
SEC22A-208ENST00000487572 CACNA1SQ13698 1873 aa24.72■■□□□ 1.55
SEC22A-208ENST00000487572 C21orf2O43822 256 aa24.72■■□□□ 1.55
SEC22A-208ENST00000487572 SF3B3Q15393 1217 aaKnown RBP24.72■■□□□ 1.55
SEC22A-208ENST00000487572 DDX46Q7L014 1031 aaKnown RBP24.72■■□□□ 1.55
SEC22A-208ENST00000487572 CRAMP1Q96RY5 1269 aa24.72■■□□□ 1.55
SEC22A-208ENST00000487572 ABCC4O15439 1325 aa24.71■■□□□ 1.55
SEC22A-208ENST00000487572 CTSWP56202 376 aa24.71■■□□□ 1.55
SEC22A-208ENST00000487572 ARHGAP27Q6ZUM4 889 aa24.71■■□□□ 1.55
SEC22A-208ENST00000487572 SLX4Q8IY92 1834 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms