RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 WDR90Q96KV7 1748 aa30.73■■■□□ 2.51
PLOD3-215ENST00000487563 HSP90AB3PQ58FF7 597 aa30.72■■■□□ 2.51
PLOD3-215ENST00000487563 HDGFL1Q5TGJ6 251 aa30.72■■■□□ 2.51
PLOD3-215ENST00000487563 UTP14AQ9BVJ6 771 aaKnown RBP30.72■■■□□ 2.51
PLOD3-215ENST00000487563 CFAP44Q96MT7 982 aa30.71■■■□□ 2.51
PLOD3-215ENST00000487563 ZNF277Q9NRM2 450 aaPredicted RBP30.71■■■□□ 2.51
PLOD3-215ENST00000487563 APAF1O14727 1248 aa30.7■■■□□ 2.51
PLOD3-215ENST00000487563 HOXB7P09629 217 aa30.7■■■□□ 2.51
PLOD3-215ENST00000487563 RBM17Q96I25 401 aaKnown RBP30.7■■■□□ 2.51
PLOD3-215ENST00000487563 CHPF2Q9P2E5 772 aa30.7■■■□□ 2.51
PLOD3-215ENST00000487563 ANKRD36CQ5JPF3 1778 aa30.69■■■□□ 2.5
PLOD3-215ENST00000487563 DDNO94850 711 aaPredicted RBP30.68■■■□□ 2.5
PLOD3-215ENST00000487563 HOXA10P31260 410 aaPredicted RBP30.68■■■□□ 2.5
PLOD3-215ENST00000487563 CALD1Q05682 793 aaKnown RBP30.68■■■□□ 2.5
PLOD3-215ENST00000487563 NLRP3Q96P20 1036 aa30.68■■■□□ 2.5
PLOD3-215ENST00000487563 CC2D2BQ6DHV5 1058 aa30.67■■■□□ 2.5
PLOD3-215ENST00000487563 MBIPQ9NS73 344 aa30.67■■■□□ 2.5
PLOD3-215ENST00000487563 RNF123Q5XPI4 1314 aa30.67■■■□□ 2.5
PLOD3-215ENST00000487563 SYNE4Q8N205 404 aa30.66■■■□□ 2.5
PLOD3-215ENST00000487563 POTECB2RU33 542 aa30.65■■■□□ 2.5
PLOD3-215ENST00000487563 IARSP41252 1262 aaKnown RBP30.65■■■□□ 2.5
PLOD3-215ENST00000487563 DUSP27Q5VZP5 1158 aa30.65■■■□□ 2.5
PLOD3-215ENST00000487563 CRAMP1Q96RY5 1269 aa30.65■■■□□ 2.5
PLOD3-215ENST00000487563 DBF4Q9UBU7 674 aaPredicted RBP30.65■■■□□ 2.5
PLOD3-215ENST00000487563 PPEF1O14829 653 aaPredicted RBP30.64■■■□□ 2.5
PLOD3-215ENST00000487563 TCIRG1Q13488 830 aa30.64■■■□□ 2.5
PLOD3-215ENST00000487563 C3orf67Q6ZVT6 689 aa30.64■■■□□ 2.5
PLOD3-215ENST00000487563 NLRP10Q86W26 655 aa30.64■■■□□ 2.5
PLOD3-215ENST00000487563 GNAI1P63096 354 aa30.63■■■□□ 2.49
PLOD3-215ENST00000487563 PSMD1Q99460 953 aa30.63■■■□□ 2.49
PLOD3-215ENST00000487563 IFT57Q9NWB7 429 aa30.63■■■□□ 2.49
PLOD3-215ENST00000487563 TCERG1O14776 1098 aaKnown RBP30.62■■■□□ 2.49
PLOD3-215ENST00000487563 HTRA3P83110 453 aa30.62■■■□□ 2.49
PLOD3-215ENST00000487563 SLC10A5Q5PT55 438 aa30.62■■■□□ 2.49
PLOD3-215ENST00000487563 TMX4Q9H1E5 349 aaPredicted RBP30.62■■■□□ 2.49
PLOD3-215ENST00000487563 TRMT112Q9UI30 125 aaKnown RBP30.62■■■□□ 2.49
PLOD3-215ENST00000487563 IQCA1LA6NCM1 817 aa30.61■■■□□ 2.49
PLOD3-215ENST00000487563 GRIPAP1Q4V328 841 aa30.61■■■□□ 2.49
PLOD3-215ENST00000487563 PLBD2Q8NHP8 589 aa30.61■■■□□ 2.49
PLOD3-215ENST00000487563 DNAJC5GQ8N7S2 189 aa30.6■■■□□ 2.49
PLOD3-215ENST00000487563 SNED1Q8TER0 1413 aa30.6■■■□□ 2.49
PLOD3-215ENST00000487563 JDP2Q8WYK2 163 aa30.6■■■□□ 2.49
PLOD3-215ENST00000487563 ZNF541Q9H0D2 1346 aa30.6■■■□□ 2.49
PLOD3-215ENST00000487563 HYPKQ9NX55 129 aa30.6■■■□□ 2.49
PLOD3-215ENST00000487563 SH3TC1Q8TE82 1336 aa30.59■■■□□ 2.49
PLOD3-215ENST00000487563 ZNF853P0CG23 659 aa30.59■■■□□ 2.49
PLOD3-215ENST00000487563 ANKRD13DQ6ZTN6 518 aa30.59■■■□□ 2.49
PLOD3-215ENST00000487563 HCLS1P14317 486 aaPredicted RBP30.58■■■□□ 2.49
PLOD3-215ENST00000487563 L3MBTL3Q96JM7 780 aaPredicted RBP30.57■■■□□ 2.48
PLOD3-215ENST00000487563 ABCC4O15439 1325 aa30.56■■■□□ 2.48
PLOD3-215ENST00000487563 ZNF428Q96B54 188 aa30.56■■■□□ 2.48
PLOD3-215ENST00000487563 ELL2O00472 640 aaPredicted RBP30.55■■■□□ 2.48
PLOD3-215ENST00000487563 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
PLOD3-215ENST00000487563 CHADLQ6NUI6 762 aa30.55■■■□□ 2.48
PLOD3-215ENST00000487563 KLRG1Q96E93 195 aa30.55■■■□□ 2.48
PLOD3-215ENST00000487563 SCN4AP35499 1836 aa30.54■■■□□ 2.48
PLOD3-215ENST00000487563 LAMB2P55268 1798 aa30.54■■■□□ 2.48
PLOD3-215ENST00000487563 FZD9O00144 591 aa30.54■■■□□ 2.48
PLOD3-215ENST00000487563 LARGE2Q8N3Y3 721 aa30.54■■■□□ 2.48
PLOD3-215ENST00000487563 EIF6P56537 245 aaKnown RBP30.53■■■□□ 2.48
PLOD3-215ENST00000487563 GOLGA2Q08379 1002 aa30.53■■■□□ 2.48
PLOD3-215ENST00000487563 DDX46Q7L014 1031 aaKnown RBP30.53■■■□□ 2.48
PLOD3-215ENST00000487563 SLC51AQ86UW1 340 aa30.53■■■□□ 2.48
PLOD3-215ENST00000487563 TAF1DQ9H5J8 278 aaPredicted RBP30.53■■■□□ 2.48
PLOD3-215ENST00000487563 ATP6V0A2Q9Y487 856 aa30.53■■■□□ 2.48
PLOD3-215ENST00000487563 ATP5J2-PTCD1G3V325 749 aa30.52■■■□□ 2.48
PLOD3-215ENST00000487563 POTEIP0CG38 1075 aa30.52■■■□□ 2.48
PLOD3-215ENST00000487563 POTEJP0CG39 1038 aa30.52■■■□□ 2.48
PLOD3-215ENST00000487563 HACL1Q9UJ83 578 aa30.52■■■□□ 2.48
PLOD3-215ENST00000487563 RIC3Q7Z5B4 369 aa30.51■■■□□ 2.47
PLOD3-215ENST00000487563 ISCA1Q9BUE6 129 aa30.51■■■□□ 2.47
PLOD3-215ENST00000487563 ZNF316A6NFI3 1004 aaPredicted RBP30.5■■■□□ 2.47
PLOD3-215ENST00000487563 BBOX1O75936 387 aa30.5■■■□□ 2.47
PLOD3-215ENST00000487563 EAPPQ56P03 285 aaPredicted RBP30.5■■■□□ 2.47
PLOD3-215ENST00000487563 LDHDQ86WU2 507 aa30.5■■■□□ 2.47
PLOD3-215ENST00000487563 GPC2Q8N158 579 aa30.5■■■□□ 2.47
PLOD3-215ENST00000487563 PPIP5K2O43314 1243 aa30.49■■■□□ 2.47
PLOD3-215ENST00000487563 ANP32CO43423 234 aa30.49■■■□□ 2.47
PLOD3-215ENST00000487563 NIM1KQ8IY84 436 aa30.49■■■□□ 2.47
PLOD3-215ENST00000487563 CHMP4AQ9BY43 222 aa30.49■■■□□ 2.47
PLOD3-215ENST00000487563 GJA3Q9Y6H8 435 aa30.49■■■□□ 2.47
PLOD3-215ENST00000487563 C8orf58Q8NAV2 365 aa30.48■■■□□ 2.47
PLOD3-215ENST00000487563 SUPT20HQ8NEM7 779 aa30.48■■■□□ 2.47
PLOD3-215ENST00000487563 FAM89AQ96GI7 184 aa30.48■■■□□ 2.47
PLOD3-215ENST00000487563 MRS2Q9HD23 443 aa30.48■■■□□ 2.47
PLOD3-215ENST00000487563 COL4A5P29400 1685 aa30.48■■■□□ 2.47
PLOD3-215ENST00000487563 EPHX2P34913 555 aa30.47■■■□□ 2.47
PLOD3-215ENST00000487563 GRAPQ13588 217 aa30.47■■■□□ 2.47
PLOD3-215ENST00000487563 GRAPLQ8TC17 118 aaPredicted RBP30.47■■■□□ 2.47
PLOD3-215ENST00000487563 PHAXQ9H814 394 aaKnown RBP30.47■■■□□ 2.47
PLOD3-215ENST00000487563 DPP8Q6V1X1 898 aaPredicted RBP30.46■■■□□ 2.47
PLOD3-215ENST00000487563 SP8Q8IXZ3 490 aa30.46■■■□□ 2.47
PLOD3-215ENST00000487563 DDX60Q8IY21 1712 aaKnown RBP30.45■■■□□ 2.47
PLOD3-215ENST00000487563 AOC3Q16853 763 aa30.45■■■□□ 2.47
PLOD3-215ENST00000487563 RTL5Q5HYW3 569 aaPredicted RBP30.45■■■□□ 2.47
PLOD3-215ENST00000487563 CCDC30Q5VVM6 783 aa30.45■■■□□ 2.47
PLOD3-215ENST00000487563 CLEC11AQ9Y240 323 aa30.45■■■□□ 2.47
PLOD3-215ENST00000487563 LMOD1P29536 600 aaPredicted RBP30.44■■■□□ 2.46
PLOD3-215ENST00000487563 MPNDQ8N594 471 aa30.44■■■□□ 2.46
PLOD3-215ENST00000487563 TRIM28Q13263 835 aaKnown RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms